Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH20Q9HBT6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 AC105265.2-201ENST00000467189 838 ntBASIC18.89■□□□□ 0.61
CDH20Q9HBT6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH20Q9HBT6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 AC087742.1-201ENST00000575880 1738 ntBASIC18.88■□□□□ 0.61
CDH20Q9HBT6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH20Q9HBT6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH20Q9HBT6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH20Q9HBT6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 OXCT2P1-201ENST00000447263 1535 ntBASIC18.85■□□□□ 0.61
CDH20Q9HBT6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH20Q9HBT6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 AC079089.2-201ENST00000531211 1277 ntBASIC18.84■□□□□ 0.61
CDH20Q9HBT6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH20Q9HBT6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms