Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 POL32YJR043C 1053 nt4.36□□□□□ -1.71
RPN11P43588 RSM26YJR101W 801 nt4.36□□□□□ -1.71
RPN11P43588 YOL118CYOL118C 309 nt4.36□□□□□ -1.71
RPN11P43588 RPA43YOR340C 981 nt4.36□□□□□ -1.71
RPN11P43588 TAF3YPL011C 1062 nt4.36□□□□□ -1.71
RPN11P43588 POC4YPL144W 447 nt4.36□□□□□ -1.71
RPN11P43588 YPL168WYPL168W 1293 nt4.36□□□□□ -1.71
RPN11P43588 DER1YBR201W 636 nt4.36□□□□□ -1.71
RPN11P43588 NCR1YPL006W 3513 nt4.36□□□□□ -1.71
RPN11P43588 TFA1YKL028W 1449 nt4.36□□□□□ -1.71
RPN11P43588 HOM3YER052C 1584 nt4.36□□□□□ -1.71
RPN11P43588 MIH1YMR036C 1665 nt4.35□□□□□ -1.71
RPN11P43588 KIN28YDL108W 921 nt4.35□□□□□ -1.71
RPN11P43588 YNL226WYNL226W 411 nt4.35□□□□□ -1.71
RPN11P43588 CPR8YNR028W 927 nt4.35□□□□□ -1.71
RPN11P43588 YOR062CYOR062C 807 nt4.35□□□□□ -1.71
RPN11P43588 YOR338WYOR338W 1092 nt4.35□□□□□ -1.71
RPN11P43588 GAS4YOL132W 1416 nt4.35□□□□□ -1.71
RPN11P43588 STP4YDL048C 1473 nt4.35□□□□□ -1.71
RPN11P43588 STI1YOR027W 1770 nt4.35□□□□□ -1.71
RPN11P43588 RTK1YDL025C 1863 nt4.35□□□□□ -1.71
RPN11P43588 RPO31YOR116C 4383 nt4.35□□□□□ -1.71
RPN11P43588 FRE1YLR214W 2061 nt4.34□□□□□ -1.71
RPN11P43588 POL12YBL035C 2118 nt4.34□□□□□ -1.71
RPN11P43588 MPS2YGL075C 1164 nt4.34□□□□□ -1.71
RPN11P43588 COX23YHR116W 456 nt4.34□□□□□ -1.71
RPN11P43588 YJR071WYJR071W 369 nt4.34□□□□□ -1.71
RPN11P43588 ENT1YDL161W 1365 nt4.34□□□□□ -1.71
RPN11P43588 NAM9YNL137C 1461 nt4.34□□□□□ -1.71
RPN11P43588 ALG11YNL048W 1647 nt4.34□□□□□ -1.71
RPN11P43588 CDC15YAR019C 2925 nt4.33□□□□□ -1.72
RPN11P43588 FAT1YBR041W 2010 nt4.33□□□□□ -1.72
RPN11P43588 TDA11YHR159W 1515 nt4.33□□□□□ -1.72
RPN11P43588 SLI1YGR212W 1407 nt4.33□□□□□ -1.72
RPN11P43588 GIC2YDR309C 1152 nt4.33□□□□□ -1.72
RPN11P43588 PEX21YGR239C 867 nt4.33□□□□□ -1.72
RPN11P43588 SEC28YIL076W 891 nt4.33□□□□□ -1.72
RPN11P43588 YIL102C-AYIL102C-A 228 nt4.33□□□□□ -1.72
RPN11P43588 NSE1YLR007W 1011 nt4.33□□□□□ -1.72
RPN11P43588 USB1YLR132C 873 nt4.33□□□□□ -1.72
RPN11P43588 RUF21RUF21 707 nt4.33□□□□□ -1.72
RPN11P43588 PRX1YBL064C 786 nt4.33□□□□□ -1.72
RPN11P43588 YNL171CYNL171C 369 nt4.33□□□□□ -1.72
RPN11P43588 SGT1YOR057W 1188 nt4.33□□□□□ -1.72
RPN11P43588 CSH1YBR161W 1131 nt4.33□□□□□ -1.72
RPN11P43588 YCL001W-AYCL001W-A 462 nt4.33□□□□□ -1.72
RPN11P43588 TYW1YPL207W 2433 nt4.33□□□□□ -1.72
RPN11P43588 YTA6YPL074W 2265 nt4.33□□□□□ -1.72
RPN11P43588 MSD1YPL104W 1977 nt4.33□□□□□ -1.72
RPN11P43588 XKS1YGR194C 1803 nt4.32□□□□□ -1.72
RPN11P43588 RKM3YBR030W 1659 nt4.32□□□□□ -1.72
RPN11P43588 UPC2YDR213W 2742 nt4.32□□□□□ -1.72
RPN11P43588 HFA1YMR207C 6372 nt4.32□□□□□ -1.72
RPN11P43588 YAL064WYAL064W 285 nt4.32□□□□□ -1.72
RPN11P43588 MCK1YNL307C 1128 nt4.32□□□□□ -1.72
RPN11P43588 SLM4YBR077C 489 nt4.32□□□□□ -1.72
RPN11P43588 LDH1YBR204C 1128 nt4.32□□□□□ -1.72
RPN11P43588 SRP72YPL210C 1923 nt4.32□□□□□ -1.72
RPN11P43588 RRN6YBL014C 2685 nt4.32□□□□□ -1.72
RPN11P43588 MSA1YOR066W 1890 nt4.32□□□□□ -1.72
RPN11P43588 EXO5YBR163W 1758 nt4.32□□□□□ -1.72
RPN11P43588 TRE2YOR256C 2430 nt4.32□□□□□ -1.72
RPN11P43588 PMC1YGL006W 3522 nt4.32□□□□□ -1.72
RPN11P43588 SOF1YLL011W 1470 nt4.31□□□□□ -1.72
RPN11P43588 MSR1YHR091C 1932 nt4.31□□□□□ -1.72
RPN11P43588 CHD1YER164W 4407 nt4.31□□□□□ -1.72
RPN11P43588 YCR100CYCR100C 951 nt4.31□□□□□ -1.72
RPN11P43588 YDR274CYDR274C 372 nt4.31□□□□□ -1.72
RPN11P43588 HAT2YEL056W 1206 nt4.31□□□□□ -1.72
RPN11P43588 PEX14YGL153W 1026 nt4.31□□□□□ -1.72
RPN11P43588 YGR051CYGR051C 324 nt4.31□□□□□ -1.72
RPN11P43588 tV(CAC)DtV(CAC)D 73 nt4.31□□□□□ -1.72
RPN11P43588 tV(CAC)HtV(CAC)H 73 nt4.31□□□□□ -1.72
RPN11P43588 CYC1YJR048W 330 nt4.31□□□□□ -1.72
RPN11P43588 TEF4YKL081W 1239 nt4.31□□□□□ -1.72
RPN11P43588 YLR163W-AYLR163W-A 114 nt4.31□□□□□ -1.72
RPN11P43588 RNA1YMR235C 1224 nt4.31□□□□□ -1.72
RPN11P43588 ATG8YBL078C 354 nt4.31□□□□□ -1.72
RPN11P43588 OSW1YOR255W 837 nt4.31□□□□□ -1.72
RPN11P43588 UAF30YOR295W 687 nt4.31□□□□□ -1.72
RPN11P43588 SMF1YOL122C 1728 nt4.31□□□□□ -1.72
RPN11P43588 POL31YJR006W 1464 nt4.3□□□□□ -1.72
RPN11P43588 IOC4YMR044W 1428 nt4.3□□□□□ -1.72
RPN11P43588 YTM1YOR272W 1383 nt4.3□□□□□ -1.72
RPN11P43588 YDR034C-CYDR034C-C 1317 nt4.3□□□□□ -1.72
RPN11P43588 YLR410W-AYLR410W-A 1317 nt4.3□□□□□ -1.72
RPN11P43588 YCR050CYCR050C 309 nt4.3□□□□□ -1.72
RPN11P43588 GEP7YGL057C 864 nt4.3□□□□□ -1.72
RPN11P43588 YGR283CYGR283C 1026 nt4.3□□□□□ -1.72
RPN11P43588 RIF2YLR453C 1188 nt4.3□□□□□ -1.72
RPN11P43588 YBL059WYBL059W 582 nt4.3□□□□□ -1.72
RPN11P43588 RPS9BYBR189W 588 nt4.3□□□□□ -1.72
RPN11P43588 RRP7YCL031C 894 nt4.3□□□□□ -1.72
RPN11P43588 TDA3YHR009C 1572 nt4.3□□□□□ -1.72
RPN11P43588 SER3YER081W 1410 nt4.29□□□□□ -1.72
RPN11P43588 YKR015CYKR015C 1707 nt4.29□□□□□ -1.72
RPN11P43588 PMT4YJR143C 2289 nt4.29□□□□□ -1.72
RPN11P43588 SAC1YKL212W 1872 nt4.29□□□□□ -1.72
RPN11P43588 SHU2YDR078C 672 nt4.29□□□□□ -1.72
RPN11P43588 YER034WYER034W 558 nt4.29□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms