RNA–Protein interactions for RNA: YOL122C

SMF1, Transcript of Divalent metal ion transporter, yeastyeast

Gene SMF1, Length 1,728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF1YOL122C MTC1P47018 478 aaKnown RBP12.08□□□□□ -0.48
SMF1YOL122C DRS1P32892 752 aaKnown RBP11.71□□□□□ -0.54
SMF1YOL122C FAP1P53971 965 aa10.64□□□□□ -0.71
SMF1YOL122C BFR2Q06631 534 aaKnown RBP10.36□□□□□ -0.75
SMF1YOL122C TFA1P36100 482 aa10.12□□□□□ -0.79
SMF1YOL122C DIP2Q12220 943 aaPredicted RBP10.09□□□□□ -0.79
SMF1YOL122C PRY3P47033 881 aa9.99□□□□□ -0.81
SMF1YOL122C PRI1P10363 409 aa9.97□□□□□ -0.81
SMF1YOL122C ISW2Q08773 1120 aa9.94□□□□□ -0.82
SMF1YOL122C AAD16Q02895 342 aa9.86□□□□□ -0.83
SMF1YOL122C AVT3P36062 692 aa9.83□□□□□ -0.84
SMF1YOL122C RPG1P38249 964 aaKnown RBP9.81□□□□□ -0.84
SMF1YOL122C RSE1Q04693 1361 aaKnown RBP9.65□□□□□ -0.86
SMF1YOL122C YCK3P39962 524 aa9.44□□□□□ -0.9
SMF1YOL122C TSR3Q12094 313 aaKnown RBP9.43□□□□□ -0.9
SMF1YOL122C HAA1Q12753 694 aaKnown RBP9.33□□□□□ -0.92
SMF1YOL122C RPL17AP05740 184 aaKnown RBP9.31□□□□□ -0.92
SMF1YOL122C RPL17BP46990 184 aaKnown RBP9.31□□□□□ -0.92
SMF1YOL122C REB1P21538 810 aa9.25□□□□□ -0.93
SMF1YOL122C MRPL32P25348 183 aa9.08□□□□□ -0.96
SMF1YOL122C RQC2Q12532 1038 aaKnown RBP8.99□□□□□ -0.97
SMF1YOL122C SPT21P35209 758 aa8.94□□□□□ -0.98
SMF1YOL122C YKR023WP36119 530 aaKnown RBP8.75□□□□□ -1.01
SMF1YOL122C RIM101P33400 625 aa8.71□□□□□ -1.01
SMF1YOL122C CDC27P38042 758 aa8.67□□□□□ -1.02
SMF1YOL122C YGL015CP33199 130 aa8.6□□□□□ -1.03
SMF1YOL122C DMA1P38823 416 aa8.57□□□□□ -1.04
SMF1YOL122C TFC8Q12308 588 aa8.57□□□□□ -1.04
SMF1YOL122C HOP09932 586 aa8.57□□□□□ -1.04
SMF1YOL122C PTP3P40048 928 aa8.51□□□□□ -1.05
SMF1YOL122C DCD1P06773 312 aa8.51□□□□□ -1.05
SMF1YOL122C OXP1P28273 1286 aa8.42□□□□□ -1.06
SMF1YOL122C UBP10P53874 792 aaPredicted RBP8.41□□□□□ -1.06
SMF1YOL122C MAP2P38174 421 aaKnown RBP8.36□□□□□ -1.07
SMF1YOL122C YIL055CP40523 627 aaKnown RBP8.32□□□□□ -1.08
SMF1YOL122C BCH2P36122 765 aa8.31□□□□□ -1.08
SMF1YOL122C SSP1P38871 571 aa8.28□□□□□ -1.08
SMF1YOL122C SCY1P53009 804 aa8.27□□□□□ -1.09
SMF1YOL122C YAH1Q12184 172 aaKnown RBP8.23□□□□□ -1.09
SMF1YOL122C RSM7P47150 247 aa8.18□□□□□ -1.1
SMF1YOL122C TAF7Q05021 590 aa8.16□□□□□ -1.1
SMF1YOL122C SLX5P32828 619 aaKnown RBP8.15□□□□□ -1.1
SMF1YOL122C EPS1P40557 701 aa8.13□□□□□ -1.11
SMF1YOL122C YLR271WQ06152 274 aa8.12□□□□□ -1.11
SMF1YOL122C BDF1P35817 686 aa8.09□□□□□ -1.11
SMF1YOL122C AI2P03876 854 aa8.08□□□□□ -1.12
SMF1YOL122C BBC1P47068 1157 aa8.08□□□□□ -1.12
SMF1YOL122C TIF4632P39936 914 aaKnown RBP8.07□□□□□ -1.12
SMF1YOL122C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
SMF1YOL122C TGL3P40308 642 aa8.01□□□□□ -1.13
SMF1YOL122C LEO1P38439 464 aa7.99□□□□□ -1.13
SMF1YOL122C BUD31P25337 157 aaPredicted RBP7.96□□□□□ -1.14
SMF1YOL122C PSD2P53037 1138 aaKnown RBP7.96□□□□□ -1.14
SMF1YOL122C MGA2P40578 1113 aa7.92□□□□□ -1.14
SMF1YOL122C SAS10Q12136 610 aaPredicted RBP7.91□□□□□ -1.14
SMF1YOL122C CST9Q06032 482 aa7.89□□□□□ -1.15
SMF1YOL122C LEU3P08638 886 aa7.82□□□□□ -1.16
SMF1YOL122C MRM1P25270 412 aa7.81□□□□□ -1.16
SMF1YOL122C NSR1P27476 414 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
SMF1YOL122C YAP5P40574 245 aa7.73□□□□□ -1.17
SMF1YOL122C YOR238WQ08634 303 aa7.73□□□□□ -1.17
SMF1YOL122C MST1P07236 462 aa7.72□□□□□ -1.17
SMF1YOL122C RTG3P38165 486 aa7.68□□□□□ -1.18
SMF1YOL122C UBP9P39967 754 aa7.66□□□□□ -1.18
SMF1YOL122C RAM2P29703 316 aa7.66□□□□□ -1.18
SMF1YOL122C VPS29P38759 282 aa7.62□□□□□ -1.19
SMF1YOL122C RCR1P38212 213 aa7.61□□□□□ -1.19
SMF1YOL122C YMR1P47147 688 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
SMF1YOL122C SIS1P25294 352 aaKnown RBP7.58□□□□□ -1.2
SMF1YOL122C PIB1Q06651 286 aa7.58□□□□□ -1.2
SMF1YOL122C SET1P38827 1080 aaKnown RBP7.57□□□□□ -1.2
SMF1YOL122C DBP1P24784 617 aaKnown RBP7.55□□□□□ -1.2
SMF1YOL122C GTT3P39996 337 aa7.55□□□□□ -1.2
SMF1YOL122C RPN1P38764 993 aaKnown RBP7.54□□□□□ -1.2
SMF1YOL122C STS1P38637 319 aa7.53□□□□□ -1.2
SMF1YOL122C YFR006WP43590 535 aa7.52□□□□□ -1.2
SMF1YOL122C DMA2P53924 522 aa7.52□□□□□ -1.2
SMF1YOL122C YPR148CQ06523 435 aa7.52□□□□□ -1.2
SMF1YOL122C YBL029C-AQ3E756 94 aa7.52□□□□□ -1.2
SMF1YOL122C VPS70P47161 811 aa7.52□□□□□ -1.21
SMF1YOL122C SPB4P25808 606 aaPredicted RBP7.48□□□□□ -1.21
SMF1YOL122C WSC3Q12215 556 aa7.48□□□□□ -1.21
SMF1YOL122C VNX1P42839 908 aa7.47□□□□□ -1.21
SMF1YOL122C CKB1P43639 278 aa7.46□□□□□ -1.22
SMF1YOL122C VMA1P17255 1071 aaKnown RBP7.44□□□□□ -1.22
SMF1YOL122C MAK11P20484 414 aaKnown RBP7.44□□□□□ -1.22
SMF1YOL122C SPP1Q03012 353 aa7.41□□□□□ -1.22
SMF1YOL122C ABP1P15891 592 aaKnown RBP7.41□□□□□ -1.22
SMF1YOL122C IFH1P39520 1085 aa7.4□□□□□ -1.23
SMF1YOL122C SAM3Q08986 587 aa7.39□□□□□ -1.23
SMF1YOL122C MSB4Q12317 492 aa7.38□□□□□ -1.23
SMF1YOL122C TIF11P38912 153 aaKnown RBP7.38□□□□□ -1.23
SMF1YOL122C YOL036WQ08206 761 aa7.38□□□□□ -1.23
SMF1YOL122C DSF2P38213 736 aa7.36□□□□□ -1.23
SMF1YOL122C SET4P42948 560 aa7.35□□□□□ -1.23
SMF1YOL122C MIF2P35201 549 aa7.35□□□□□ -1.23
SMF1YOL122C PBS2P08018 668 aa7.34□□□□□ -1.23
SMF1YOL122C COQ8P27697 501 aa7.34□□□□□ -1.23
SMF1YOL122C EAP1P36041 632 aaKnown RBP7.33□□□□□ -1.24
SMF1YOL122C ULI1P43604 169 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms