RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeastyeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX21YGR239C DRS1P32892 752 aaKnown RBP12.53□□□□□ -0.4
PEX21YGR239C MTC1P47018 478 aaKnown RBP11.93□□□□□ -0.5
PEX21YGR239C BFR2Q06631 534 aaKnown RBP11.05□□□□□ -0.64
PEX21YGR239C TFA1P36100 482 aa10.56□□□□□ -0.72
PEX21YGR239C DIP2Q12220 943 aaPredicted RBP10.47□□□□□ -0.73
PEX21YGR239C AVT3P36062 692 aa10.37□□□□□ -0.75
PEX21YGR239C RSE1Q04693 1361 aaKnown RBP9.75□□□□□ -0.85
PEX21YGR239C ISW2Q08773 1120 aa9.65□□□□□ -0.86
PEX21YGR239C RPG1P38249 964 aaKnown RBP9.52□□□□□ -0.89
PEX21YGR239C RQC2Q12532 1038 aaKnown RBP9.51□□□□□ -0.89
PEX21YGR239C FAP1P53971 965 aa9.48□□□□□ -0.89
PEX21YGR239C RPL17AP05740 184 aaKnown RBP9.4□□□□□ -0.9
PEX21YGR239C RPL17BP46990 184 aaKnown RBP9.4□□□□□ -0.9
PEX21YGR239C PRI1P10363 409 aa9.31□□□□□ -0.92
PEX21YGR239C REB1P21538 810 aa9.28□□□□□ -0.92
PEX21YGR239C AAD16Q02895 342 aa9.11□□□□□ -0.95
PEX21YGR239C PTP3P40048 928 aa9.1□□□□□ -0.95
PEX21YGR239C SPT21P35209 758 aa8.97□□□□□ -0.97
PEX21YGR239C DMA1P38823 416 aa8.97□□□□□ -0.97
PEX21YGR239C TSR3Q12094 313 aaKnown RBP8.95□□□□□ -0.98
PEX21YGR239C RIM101P33400 625 aa8.93□□□□□ -0.98
PEX21YGR239C PRY3P47033 881 aa8.88□□□□□ -0.99
PEX21YGR239C SSP1P38871 571 aa8.81□□□□□ -1
PEX21YGR239C YAH1Q12184 172 aaKnown RBP8.79□□□□□ -1
PEX21YGR239C OXP1P28273 1286 aa8.7□□□□□ -1.02
PEX21YGR239C YIL055CP40523 627 aaKnown RBP8.68□□□□□ -1.02
PEX21YGR239C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
PEX21YGR239C YKR023WP36119 530 aaKnown RBP8.6□□□□□ -1.03
PEX21YGR239C MRPL32P25348 183 aa8.58□□□□□ -1.04
PEX21YGR239C YLR271WQ06152 274 aa8.56□□□□□ -1.04
PEX21YGR239C HOP09932 586 aa8.52□□□□□ -1.05
PEX21YGR239C DCD1P06773 312 aa8.48□□□□□ -1.05
PEX21YGR239C RSM7P47150 247 aa8.47□□□□□ -1.05
PEX21YGR239C TFC8Q12308 588 aa8.44□□□□□ -1.06
PEX21YGR239C MGA2P40578 1113 aa8.43□□□□□ -1.06
PEX21YGR239C CST9Q06032 482 aa8.36□□□□□ -1.07
PEX21YGR239C CDC27P38042 758 aa8.35□□□□□ -1.07
PEX21YGR239C YCK3P39962 524 aa8.35□□□□□ -1.07
PEX21YGR239C HAA1Q12753 694 aaKnown RBP8.33□□□□□ -1.08
PEX21YGR239C AI2P03876 854 aa8.31□□□□□ -1.08
PEX21YGR239C TAF7Q05021 590 aa8.31□□□□□ -1.08
PEX21YGR239C BBC1P47068 1157 aa8.26□□□□□ -1.09
PEX21YGR239C PSD2P53037 1138 aaKnown RBP8.25□□□□□ -1.09
PEX21YGR239C LEO1P38439 464 aa8.24□□□□□ -1.09
PEX21YGR239C BCH2P36122 765 aa8.23□□□□□ -1.09
PEX21YGR239C SAS10Q12136 610 aaPredicted RBP8.19□□□□□ -1.1
PEX21YGR239C EPS1P40557 701 aa8.14□□□□□ -1.11
PEX21YGR239C LEU3P08638 886 aa8.11□□□□□ -1.11
PEX21YGR239C MRM1P25270 412 aa8.11□□□□□ -1.11
PEX21YGR239C SCY1P53009 804 aa8.07□□□□□ -1.12
PEX21YGR239C RAM2P29703 316 aa8.06□□□□□ -1.12
PEX21YGR239C BDF1P35817 686 aa8.05□□□□□ -1.12
PEX21YGR239C RCR1P38212 213 aa8.04□□□□□ -1.12
PEX21YGR239C SET1P38827 1080 aaKnown RBP8.02□□□□□ -1.13
PEX21YGR239C RTG3P38165 486 aa7.99□□□□□ -1.13
PEX21YGR239C SPB4P25808 606 aaPredicted RBP7.97□□□□□ -1.13
PEX21YGR239C VPS70P47161 811 aa7.97□□□□□ -1.13
PEX21YGR239C MAP2P38174 421 aaKnown RBP7.96□□□□□ -1.14
PEX21YGR239C UBP10P53874 792 aaPredicted RBP7.9□□□□□ -1.14
PEX21YGR239C MAK11P20484 414 aaKnown RBP7.89□□□□□ -1.15
PEX21YGR239C IFH1P39520 1085 aa7.89□□□□□ -1.15
PEX21YGR239C RPN1P38764 993 aaKnown RBP7.88□□□□□ -1.15
PEX21YGR239C CKB1P43639 278 aa7.88□□□□□ -1.15
PEX21YGR239C SLX5P32828 619 aaKnown RBP7.86□□□□□ -1.15
PEX21YGR239C YPR148CQ06523 435 aa7.86□□□□□ -1.15
PEX21YGR239C COQ8P27697 501 aa7.81□□□□□ -1.16
PEX21YGR239C YGL015CP33199 130 aa7.81□□□□□ -1.16
PEX21YGR239C VPS29P38759 282 aa7.81□□□□□ -1.16
PEX21YGR239C MIF2P35201 549 aa7.8□□□□□ -1.16
PEX21YGR239C DMA2P53924 522 aa7.79□□□□□ -1.16
PEX21YGR239C PBS2P08018 668 aa7.76□□□□□ -1.17
PEX21YGR239C YFR006WP43590 535 aa7.76□□□□□ -1.17
PEX21YGR239C YMR1P47147 688 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
PEX21YGR239C STS1P38637 319 aa7.73□□□□□ -1.17
PEX21YGR239C DBP1P24784 617 aaKnown RBP7.72□□□□□ -1.17
PEX21YGR239C DSF2P38213 736 aa7.71□□□□□ -1.18
PEX21YGR239C YOR238WQ08634 303 aa7.69□□□□□ -1.18
PEX21YGR239C EDS1P38073 919 aa7.68□□□□□ -1.18
PEX21YGR239C PIB1Q06651 286 aa7.68□□□□□ -1.18
PEX21YGR239C MAM3Q12296 706 aa7.68□□□□□ -1.18
PEX21YGR239C IES2P40154 320 aa7.65□□□□□ -1.18
PEX21YGR239C REF2P42073 533 aaPredicted RBP7.65□□□□□ -1.18
PEX21YGR239C TIF4632P39936 914 aaKnown RBP7.64□□□□□ -1.19
PEX21YGR239C GLC3P32775 704 aa7.63□□□□□ -1.19
PEX21YGR239C YNR021WP53723 404 aaKnown RBP7.62□□□□□ -1.19
PEX21YGR239C NOP53Q12080 455 aaKnown RBP7.62□□□□□ -1.19
PEX21YGR239C KIN1P13185 1064 aa7.61□□□□□ -1.19
PEX21YGR239C PTC3P34221 468 aaKnown RBP7.61□□□□□ -1.19
PEX21YGR239C YAP5P40574 245 aa7.57□□□□□ -1.2
PEX21YGR239C DIT2P21595 489 aa7.55□□□□□ -1.2
PEX21YGR239C VHR2P40041 505 aa7.54□□□□□ -1.2
PEX21YGR239C ATH1P48016 1211 aa7.53□□□□□ -1.2
PEX21YGR239C MAK21Q12176 1025 aaKnown RBP7.53□□□□□ -1.2
PEX21YGR239C VMA1P17255 1071 aaKnown RBP7.52□□□□□ -1.21
PEX21YGR239C NUP42P49686 430 aaKnown RBP7.52□□□□□ -1.21
PEX21YGR239C ATF2P53296 535 aa7.52□□□□□ -1.21
PEX21YGR239C AIM7Q12156 149 aa7.51□□□□□ -1.21
PEX21YGR239C RLF2Q12495 606 aa7.51□□□□□ -1.21
PEX21YGR239C COX6P00427 148 aa7.5□□□□□ -1.21
PEX21YGR239C HGH1P48362 394 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms