RNA–Protein interactions for RNA: YMR207C

HFA1, Transcript of Mitochondrial acetyl-coenzyme A carboxylase, yeastyeast

Gene HFA1, Length 6,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFA1YMR207C RQC2Q12532 1038 aaKnown RBP8.02□□□□□ -1.13
HFA1YMR207C DRS1P32892 752 aaKnown RBP7.71□□□□□ -1.17
HFA1YMR207C TFA1P36100 482 aa7.66□□□□□ -1.18
HFA1YMR207C TAF7Q05021 590 aa7.58□□□□□ -1.2
HFA1YMR207C BFR2Q06631 534 aaKnown RBP7.16□□□□□ -1.26
HFA1YMR207C LEO1P38439 464 aa6.84□□□□□ -1.31
HFA1YMR207C MTC1P47018 478 aaKnown RBP6.74□□□□□ -1.33
HFA1YMR207C URN1Q06525 465 aaKnown RBP6.58□□□□□ -1.36
HFA1YMR207C AVT3P36062 692 aa6.57□□□□□ -1.36
HFA1YMR207C NAP1P25293 417 aaKnown RBP6.56□□□□□ -1.36
HFA1YMR207C AIM44Q99299 758 aa6.56□□□□□ -1.36
HFA1YMR207C DMA1P38823 416 aa6.53□□□□□ -1.36
HFA1YMR207C YRB30P53107 440 aaPredicted RBP6.47□□□□□ -1.37
HFA1YMR207C LEU3P08638 886 aa6.36□□□□□ -1.39
HFA1YMR207C IFH1P39520 1085 aa6.34□□□□□ -1.39
HFA1YMR207C IOC4Q04213 475 aa6.3□□□□□ -1.4
HFA1YMR207C TOP1P04786 769 aa6.29□□□□□ -1.4
HFA1YMR207C ORC1P54784 914 aaPredicted RBP6.25□□□□□ -1.41
HFA1YMR207C DIP2Q12220 943 aaPredicted RBP6.25□□□□□ -1.41
HFA1YMR207C MNN4P36044 1178 aa6.22□□□□□ -1.41
HFA1YMR207C SIS2P36024 562 aa6.16□□□□□ -1.42
HFA1YMR207C RLF2Q12495 606 aa6.15□□□□□ -1.42
HFA1YMR207C SAS10Q12136 610 aaPredicted RBP6.13□□□□□ -1.43
HFA1YMR207C SNU71P53207 620 aaKnown RBP6.13□□□□□ -1.43
HFA1YMR207C YFR016CP43597 1233 aaKnown RBP6.12□□□□□ -1.43
HFA1YMR207C KRI1P42846 591 aaKnown RBP6.09□□□□□ -1.43
HFA1YMR207C RPS0BP46654 252 aaKnown RBP6.09□□□□□ -1.43
HFA1YMR207C CAB3P36076 571 aa6.06□□□□□ -1.44
HFA1YMR207C RPN1P38764 993 aaKnown RBP6.04□□□□□ -1.44
HFA1YMR207C EBP2P36049 427 aaKnown RBP6.04□□□□□ -1.44
HFA1YMR207C DMA2P53924 522 aa6□□□□□ -1.45
HFA1YMR207C ABP1P15891 592 aaKnown RBP5.98□□□□□ -1.45
HFA1YMR207C NOP8Q08287 484 aaPredicted RBP5.96□□□□□ -1.46
HFA1YMR207C ASF1P32447 279 aa5.95□□□□□ -1.46
HFA1YMR207C SUB1P54000 292 aaKnown RBP5.93□□□□□ -1.46
HFA1YMR207C CKB1P43639 278 aa5.91□□□□□ -1.46
HFA1YMR207C GIN4Q12263 1142 aa5.91□□□□□ -1.46
HFA1YMR207C DOS2P54858 310 aa5.9□□□□□ -1.46
HFA1YMR207C RLP24Q07915 199 aaKnown RBP5.9□□□□□ -1.47
HFA1YMR207C SWE1P32944 819 aa5.89□□□□□ -1.47
HFA1YMR207C VPS72Q03388 795 aa5.89□□□□□ -1.47
HFA1YMR207C BRL1P38770 471 aa5.89□□□□□ -1.47
HFA1YMR207C OSW7P43611 510 aa5.87□□□□□ -1.47
HFA1YMR207C NUG1P40010 520 aaKnown RBP5.86□□□□□ -1.47
HFA1YMR207C PSH1Q12161 406 aa5.86□□□□□ -1.47
HFA1YMR207C TOA1P32773 286 aa5.85□□□□□ -1.47
HFA1YMR207C NAB3P38996 802 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
HFA1YMR207C CWC22P53333 577 aaKnown RBP5.85□□□□□ -1.47
HFA1YMR207C MDG1P53885 366 aa5.84□□□□□ -1.47
HFA1YMR207C NOP7P53261 605 aaKnown RBP5.83□□□□□ -1.48
HFA1YMR207C YML020WQ03722 664 aa5.83□□□□□ -1.48
HFA1YMR207C DEF1P35732 738 aaKnown RBP5.83□□□□□ -1.48
HFA1YMR207C FAR11P53917 953 aa5.79□□□□□ -1.48
HFA1YMR207C RPS0AP32905 252 aaKnown RBP5.78□□□□□ -1.48
HFA1YMR207C ATG36P46983 293 aa5.78□□□□□ -1.48
HFA1YMR207C HGH1P48362 394 aaKnown RBP5.76□□□□□ -1.49
HFA1YMR207C FPR3P38911 411 aaKnown RBP5.76□□□□□ -1.49
HFA1YMR207C HIF1Q12373 385 aa5.76□□□□□ -1.49
HFA1YMR207C YTA7P40340 1379 aa5.74□□□□□ -1.49
HFA1YMR207C TPO2P53283 614 aa5.74□□□□□ -1.49
HFA1YMR207C BRN1P38170 754 aa5.73□□□□□ -1.49
HFA1YMR207C RTS3P53289 263 aa5.72□□□□□ -1.49
HFA1YMR207C PTP3P40048 928 aa5.71□□□□□ -1.5
HFA1YMR207C SLX8P40072 274 aa5.7□□□□□ -1.5
HFA1YMR207C RNA1P11745 407 aaKnown RBP5.69□□□□□ -1.5
HFA1YMR207C GEF1P37020 779 aa5.69□□□□□ -1.5
HFA1YMR207C SSP1P38871 571 aa5.67□□□□□ -1.5
HFA1YMR207C FPR4Q06205 392 aaPredicted RBP5.67□□□□□ -1.5
HFA1YMR207C SPC42P36094 363 aa5.67□□□□□ -1.5
HFA1YMR207C PAM1P37304 830 aaKnown RBP5.67□□□□□ -1.5
HFA1YMR207C SSF1P38789 453 aaPredicted RBP5.67□□□□□ -1.5
HFA1YMR207C MRX12P47084 519 aa5.67□□□□□ -1.5
HFA1YMR207C SSA1P10591 642 aaKnown RBP5.66□□□□□ -1.5
HFA1YMR207C RSE1Q04693 1361 aaKnown RBP5.66□□□□□ -1.5
HFA1YMR207C NOP2P40991 618 aaKnown RBP5.65□□□□□ -1.5
HFA1YMR207C LAM6Q08001 693 aa5.65□□□□□ -1.51
HFA1YMR207C QCR6P00127 147 aa5.64□□□□□ -1.51
HFA1YMR207C HSP82P02829 709 aaKnown RBP5.64□□□□□ -1.51
HFA1YMR207C SLD2P34252 453 aa5.63□□□□□ -1.51
HFA1YMR207C OCA5P38738 679 aa5.63□□□□□ -1.51
HFA1YMR207C HOS4P40480 1083 aa5.63□□□□□ -1.51
HFA1YMR207C NMD2P38798 1089 aaKnown RBP5.63□□□□□ -1.51
HFA1YMR207C TY4A-JP47023 414 aa5.62□□□□□ -1.51
HFA1YMR207C RAD2P07276 1031 aa5.62□□□□□ -1.51
HFA1YMR207C YAF9P53930 226 aa5.62□□□□□ -1.51
HFA1YMR207C BRE1Q07457 700 aaKnown RBP5.62□□□□□ -1.51
HFA1YMR207C MFT1P33441 392 aaKnown RBP5.61□□□□□ -1.51
HFA1YMR207C SSA2P10592 639 aaKnown RBP5.61□□□□□ -1.51
HFA1YMR207C PDR1P12383 1068 aa5.61□□□□□ -1.51
HFA1YMR207C SPT2P06843 333 aaPredicted RBP5.6□□□□□ -1.51
HFA1YMR207C RPT2P40327 437 aaKnown RBP5.6□□□□□ -1.51
HFA1YMR207C MPP10P47083 593 aaKnown RBP5.6□□□□□ -1.51
HFA1YMR207C MET10P39692 1035 aa5.6□□□□□ -1.51
HFA1YMR207C ISW1P38144 1129 aa5.59□□□□□ -1.51
HFA1YMR207C BUD21Q08492 214 aaPredicted RBP5.59□□□□□ -1.52
HFA1YMR207C NHA1Q99271 985 aa5.58□□□□□ -1.52
HFA1YMR207C HSC82P15108 705 aaKnown RBP5.58□□□□□ -1.52
HFA1YMR207C KIP3P53086 805 aaKnown RBP5.57□□□□□ -1.52
HFA1YMR207C ZDS1P50111 915 aaKnown RBP5.57□□□□□ -1.52
HFA1YMR207C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms