RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeastyeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA1YOR066W DRS1P32892 752 aaKnown RBP11.78□□□□□ -0.52
MSA1YOR066W MTC1P47018 478 aaKnown RBP11.29□□□□□ -0.6
MSA1YOR066W BFR2Q06631 534 aaKnown RBP10.37□□□□□ -0.75
MSA1YOR066W TFA1P36100 482 aa10.06□□□□□ -0.8
MSA1YOR066W DIP2Q12220 943 aaPredicted RBP9.89□□□□□ -0.83
MSA1YOR066W AVT3P36062 692 aa9.87□□□□□ -0.83
MSA1YOR066W RSE1Q04693 1361 aaKnown RBP9.2□□□□□ -0.94
MSA1YOR066W ISW2Q08773 1120 aa9.1□□□□□ -0.95
MSA1YOR066W RQC2Q12532 1038 aaKnown RBP9□□□□□ -0.97
MSA1YOR066W RPG1P38249 964 aaKnown RBP8.96□□□□□ -0.97
MSA1YOR066W PRI1P10363 409 aa8.88□□□□□ -0.99
MSA1YOR066W FAP1P53971 965 aa8.85□□□□□ -0.99
MSA1YOR066W RPL17AP05740 184 aaKnown RBP8.82□□□□□ -1
MSA1YOR066W RPL17BP46990 184 aaKnown RBP8.82□□□□□ -1
MSA1YOR066W REB1P21538 810 aa8.69□□□□□ -1.02
MSA1YOR066W AAD16Q02895 342 aa8.66□□□□□ -1.02
MSA1YOR066W SPT21P35209 758 aa8.53□□□□□ -1.04
MSA1YOR066W RIM101P33400 625 aa8.51□□□□□ -1.05
MSA1YOR066W PTP3P40048 928 aa8.5□□□□□ -1.05
MSA1YOR066W DMA1P38823 416 aa8.45□□□□□ -1.06
MSA1YOR066W TSR3Q12094 313 aaKnown RBP8.44□□□□□ -1.06
MSA1YOR066W SSP1P38871 571 aa8.33□□□□□ -1.08
MSA1YOR066W PRY3P47033 881 aa8.28□□□□□ -1.08
MSA1YOR066W OXP1P28273 1286 aa8.27□□□□□ -1.09
MSA1YOR066W YAH1Q12184 172 aaKnown RBP8.2□□□□□ -1.1
MSA1YOR066W YKR023WP36119 530 aaKnown RBP8.17□□□□□ -1.1
MSA1YOR066W YIL055CP40523 627 aaKnown RBP8.17□□□□□ -1.1
MSA1YOR066W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
MSA1YOR066W YLR271WQ06152 274 aa8.12□□□□□ -1.11
MSA1YOR066W MRPL32P25348 183 aa8.08□□□□□ -1.12
MSA1YOR066W RSM7P47150 247 aa8.02□□□□□ -1.12
MSA1YOR066W MGA2P40578 1113 aa8.01□□□□□ -1.13
MSA1YOR066W TFC8Q12308 588 aa8.01□□□□□ -1.13
MSA1YOR066W HOP09932 586 aa8□□□□□ -1.13
MSA1YOR066W DCD1P06773 312 aa7.94□□□□□ -1.14
MSA1YOR066W TAF7Q05021 590 aa7.94□□□□□ -1.14
MSA1YOR066W YCK3P39962 524 aa7.92□□□□□ -1.14
MSA1YOR066W CDC27P38042 758 aa7.92□□□□□ -1.14
MSA1YOR066W LEO1P38439 464 aa7.92□□□□□ -1.14
MSA1YOR066W CST9Q06032 482 aa7.89□□□□□ -1.15
MSA1YOR066W SAS10Q12136 610 aaPredicted RBP7.87□□□□□ -1.15
MSA1YOR066W PSD2P53037 1138 aaKnown RBP7.86□□□□□ -1.15
MSA1YOR066W AI2P03876 854 aa7.85□□□□□ -1.15
MSA1YOR066W HAA1Q12753 694 aaKnown RBP7.83□□□□□ -1.16
MSA1YOR066W BCH2P36122 765 aa7.8□□□□□ -1.16
MSA1YOR066W BBC1P47068 1157 aa7.79□□□□□ -1.16
MSA1YOR066W LEU3P08638 886 aa7.77□□□□□ -1.17
MSA1YOR066W EPS1P40557 701 aa7.68□□□□□ -1.18
MSA1YOR066W RAM2P29703 316 aa7.66□□□□□ -1.18
MSA1YOR066W MRM1P25270 412 aa7.64□□□□□ -1.19
MSA1YOR066W BDF1P35817 686 aa7.63□□□□□ -1.19
MSA1YOR066W SET1P38827 1080 aaKnown RBP7.61□□□□□ -1.19
MSA1YOR066W RCR1P38212 213 aa7.59□□□□□ -1.19
MSA1YOR066W SCY1P53009 804 aa7.58□□□□□ -1.2
MSA1YOR066W RTG3P38165 486 aa7.57□□□□□ -1.2
MSA1YOR066W CKB1P43639 278 aa7.53□□□□□ -1.2
MSA1YOR066W UBP10P53874 792 aaPredicted RBP7.53□□□□□ -1.2
MSA1YOR066W MAP2P38174 421 aaKnown RBP7.53□□□□□ -1.2
MSA1YOR066W RPN1P38764 993 aaKnown RBP7.53□□□□□ -1.2
MSA1YOR066W IFH1P39520 1085 aa7.53□□□□□ -1.2
MSA1YOR066W YPR148CQ06523 435 aa7.53□□□□□ -1.2
MSA1YOR066W VPS70P47161 811 aa7.52□□□□□ -1.21
MSA1YOR066W MAK11P20484 414 aaKnown RBP7.51□□□□□ -1.21
MSA1YOR066W SPB4P25808 606 aaPredicted RBP7.51□□□□□ -1.21
MSA1YOR066W YGL015CP33199 130 aa7.45□□□□□ -1.22
MSA1YOR066W VPS29P38759 282 aa7.43□□□□□ -1.22
MSA1YOR066W SLX5P32828 619 aaKnown RBP7.41□□□□□ -1.22
MSA1YOR066W COQ8P27697 501 aa7.4□□□□□ -1.23
MSA1YOR066W DMA2P53924 522 aa7.38□□□□□ -1.23
MSA1YOR066W DSF2P38213 736 aa7.37□□□□□ -1.23
MSA1YOR066W YMR1P47147 688 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
MSA1YOR066W PBS2P08018 668 aa7.36□□□□□ -1.23
MSA1YOR066W NOP53Q12080 455 aaKnown RBP7.36□□□□□ -1.23
MSA1YOR066W MIF2P35201 549 aa7.33□□□□□ -1.24
MSA1YOR066W STS1P38637 319 aa7.32□□□□□ -1.24
MSA1YOR066W DBP1P24784 617 aaKnown RBP7.31□□□□□ -1.24
MSA1YOR066W EDS1P38073 919 aa7.28□□□□□ -1.24
MSA1YOR066W YFR006WP43590 535 aa7.28□□□□□ -1.24
MSA1YOR066W REF2P42073 533 aaPredicted RBP7.27□□□□□ -1.25
MSA1YOR066W YNR021WP53723 404 aaKnown RBP7.27□□□□□ -1.25
MSA1YOR066W YOR238WQ08634 303 aa7.26□□□□□ -1.25
MSA1YOR066W MAM3Q12296 706 aa7.26□□□□□ -1.25
MSA1YOR066W KIN1P13185 1064 aa7.23□□□□□ -1.25
MSA1YOR066W PTC3P34221 468 aaKnown RBP7.22□□□□□ -1.25
MSA1YOR066W TIF4632P39936 914 aaKnown RBP7.21□□□□□ -1.25
MSA1YOR066W IES2P40154 320 aa7.21□□□□□ -1.26
MSA1YOR066W GLC3P32775 704 aa7.2□□□□□ -1.26
MSA1YOR066W AIM7Q12156 149 aa7.2□□□□□ -1.26
MSA1YOR066W NSR1P27476 414 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
MSA1YOR066W NUP42P49686 430 aaKnown RBP7.19□□□□□ -1.26
MSA1YOR066W MAK21Q12176 1025 aaKnown RBP7.19□□□□□ -1.26
MSA1YOR066W DIT2P21595 489 aa7.19□□□□□ -1.26
MSA1YOR066W COX6P00427 148 aa7.18□□□□□ -1.26
MSA1YOR066W YAP5P40574 245 aa7.17□□□□□ -1.26
MSA1YOR066W RLF2Q12495 606 aa7.17□□□□□ -1.26
MSA1YOR066W TGL3P40308 642 aa7.15□□□□□ -1.26
MSA1YOR066W PIB1Q06651 286 aa7.15□□□□□ -1.26
MSA1YOR066W VMA1P17255 1071 aaKnown RBP7.13□□□□□ -1.27
MSA1YOR066W ABP1P15891 592 aaKnown RBP7.13□□□□□ -1.27
MSA1YOR066W HGH1P48362 394 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms