RNA–Protein interactions for RNA: YBL078C

ATG8, Transcript of Component of autophagosomes and Cvt vesicles, yeastyeast

Gene ATG8, Length 354 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG8YBL078C MTC1P47018 478 aaKnown RBP12.68□□□□□ -0.38
ATG8YBL078C DRS1P32892 752 aaKnown RBP12.06□□□□□ -0.48
ATG8YBL078C FAP1P53971 965 aa11.17□□□□□ -0.62
ATG8YBL078C PRI1P10363 409 aa10.56□□□□□ -0.72
ATG8YBL078C DIP2Q12220 943 aaPredicted RBP10.5□□□□□ -0.73
ATG8YBL078C PRY3P47033 881 aa10.48□□□□□ -0.73
ATG8YBL078C AAD16Q02895 342 aa10.48□□□□□ -0.73
ATG8YBL078C ISW2Q08773 1120 aa10.48□□□□□ -0.73
ATG8YBL078C RPG1P38249 964 aaKnown RBP10.35□□□□□ -0.75
ATG8YBL078C AVT3P36062 692 aa10.17□□□□□ -0.78
ATG8YBL078C BFR2Q06631 534 aaKnown RBP10.14□□□□□ -0.79
ATG8YBL078C RSE1Q04693 1361 aaKnown RBP10.1□□□□□ -0.79
ATG8YBL078C TSR3Q12094 313 aaKnown RBP9.99□□□□□ -0.81
ATG8YBL078C YCK3P39962 524 aa9.87□□□□□ -0.83
ATG8YBL078C HAA1Q12753 694 aaKnown RBP9.86□□□□□ -0.83
ATG8YBL078C RPL17AP05740 184 aaKnown RBP9.75□□□□□ -0.85
ATG8YBL078C RPL17BP46990 184 aaKnown RBP9.75□□□□□ -0.85
ATG8YBL078C REB1P21538 810 aa9.7□□□□□ -0.86
ATG8YBL078C MRPL32P25348 183 aa9.62□□□□□ -0.87
ATG8YBL078C SPT21P35209 758 aa9.34□□□□□ -0.91
ATG8YBL078C TFA1P36100 482 aa9.29□□□□□ -0.92
ATG8YBL078C YKR023WP36119 530 aaKnown RBP9.18□□□□□ -0.94
ATG8YBL078C YGL015CP33199 130 aa9.16□□□□□ -0.94
ATG8YBL078C CDC27P38042 758 aa9.15□□□□□ -0.94
ATG8YBL078C RIM101P33400 625 aa9.07□□□□□ -0.96
ATG8YBL078C TFC8Q12308 588 aa9.01□□□□□ -0.97
ATG8YBL078C HOP09932 586 aa9□□□□□ -0.97
ATG8YBL078C DCD1P06773 312 aa8.94□□□□□ -0.98
ATG8YBL078C UBP10P53874 792 aaPredicted RBP8.9□□□□□ -0.98
ATG8YBL078C MAP2P38174 421 aaKnown RBP8.85□□□□□ -0.99
ATG8YBL078C OXP1P28273 1286 aa8.76□□□□□ -1.01
ATG8YBL078C SCY1P53009 804 aa8.72□□□□□ -1.01
ATG8YBL078C BCH2P36122 765 aa8.71□□□□□ -1.02
ATG8YBL078C YIL055CP40523 627 aaKnown RBP8.66□□□□□ -1.02
ATG8YBL078C RQC2Q12532 1038 aaKnown RBP8.66□□□□□ -1.02
ATG8YBL078C PTP3P40048 928 aa8.64□□□□□ -1.03
ATG8YBL078C SLX5P32828 619 aaKnown RBP8.6□□□□□ -1.03
ATG8YBL078C YAH1Q12184 172 aaKnown RBP8.54□□□□□ -1.04
ATG8YBL078C TIF4632P39936 914 aaKnown RBP8.53□□□□□ -1.04
ATG8YBL078C EPS1P40557 701 aa8.52□□□□□ -1.05
ATG8YBL078C RSM7P47150 247 aa8.52□□□□□ -1.05
ATG8YBL078C BDF1P35817 686 aa8.47□□□□□ -1.05
ATG8YBL078C TGL3P40308 642 aa8.47□□□□□ -1.05
ATG8YBL078C BBC1P47068 1157 aa8.43□□□□□ -1.06
ATG8YBL078C AI2P03876 854 aa8.42□□□□□ -1.06
ATG8YBL078C YLR271WQ06152 274 aa8.4□□□□□ -1.06
ATG8YBL078C SSP1P38871 571 aa8.37□□□□□ -1.07
ATG8YBL078C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
ATG8YBL078C BUD31P25337 157 aaPredicted RBP8.29□□□□□ -1.08
ATG8YBL078C PSD2P53037 1138 aaKnown RBP8.26□□□□□ -1.09
ATG8YBL078C NSR1P27476 414 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
ATG8YBL078C UBP9P39967 754 aa8.17□□□□□ -1.1
ATG8YBL078C MGA2P40578 1113 aa8.15□□□□□ -1.1
ATG8YBL078C YOR238WQ08634 303 aa8.15□□□□□ -1.1
ATG8YBL078C MST1P07236 462 aa8.14□□□□□ -1.11
ATG8YBL078C TAF7Q05021 590 aa8.14□□□□□ -1.11
ATG8YBL078C MRM1P25270 412 aa8.13□□□□□ -1.11
ATG8YBL078C YAP5P40574 245 aa8.13□□□□□ -1.11
ATG8YBL078C CST9Q06032 482 aa8.11□□□□□ -1.11
ATG8YBL078C DMA1P38823 416 aa8.02□□□□□ -1.13
ATG8YBL078C RTG3P38165 486 aa7.98□□□□□ -1.13
ATG8YBL078C YBL029C-AQ3E756 94 aa7.97□□□□□ -1.13
ATG8YBL078C VPS29P38759 282 aa7.94□□□□□ -1.14
ATG8YBL078C GTT3P39996 337 aa7.94□□□□□ -1.14
ATG8YBL078C PIB1Q06651 286 aa7.94□□□□□ -1.14
ATG8YBL078C SIS1P25294 352 aaKnown RBP7.93□□□□□ -1.14
ATG8YBL078C YMR1P47147 688 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
ATG8YBL078C VNX1P42839 908 aa7.91□□□□□ -1.14
ATG8YBL078C WSC3Q12215 556 aa7.9□□□□□ -1.14
ATG8YBL078C RCR1P38212 213 aa7.89□□□□□ -1.15
ATG8YBL078C DBP1P24784 617 aaKnown RBP7.88□□□□□ -1.15
ATG8YBL078C STS1P38637 319 aa7.85□□□□□ -1.15
ATG8YBL078C YFR006WP43590 535 aa7.85□□□□□ -1.15
ATG8YBL078C SPP1Q03012 353 aa7.85□□□□□ -1.15
ATG8YBL078C TIF11P38912 153 aaKnown RBP7.79□□□□□ -1.16
ATG8YBL078C VMA1P17255 1071 aaKnown RBP7.78□□□□□ -1.16
ATG8YBL078C MSB4Q12317 492 aa7.76□□□□□ -1.17
ATG8YBL078C YOL036WQ08206 761 aa7.74□□□□□ -1.17
ATG8YBL078C RAM2P29703 316 aa7.73□□□□□ -1.17
ATG8YBL078C SAM3Q08986 587 aa7.73□□□□□ -1.17
ATG8YBL078C SET4P42948 560 aa7.72□□□□□ -1.17
ATG8YBL078C ULI1P43604 169 aa7.72□□□□□ -1.17
ATG8YBL078C EAP1P36041 632 aaKnown RBP7.71□□□□□ -1.18
ATG8YBL078C MAK11P20484 414 aaKnown RBP7.7□□□□□ -1.18
ATG8YBL078C IOC2Q12072 812 aa7.68□□□□□ -1.18
ATG8YBL078C LDB19Q12502 818 aa7.67□□□□□ -1.18
ATG8YBL078C LEO1P38439 464 aa7.66□□□□□ -1.18
ATG8YBL078C TRP5P00931 707 aaKnown RBP7.64□□□□□ -1.19
ATG8YBL078C FKH1P40466 484 aa7.64□□□□□ -1.19
ATG8YBL078C GYP5Q12344 894 aa7.64□□□□□ -1.19
ATG8YBL078C ABP1P15891 592 aaKnown RBP7.62□□□□□ -1.19
ATG8YBL078C MIF2P35201 549 aa7.62□□□□□ -1.19
ATG8YBL078C AIR2Q12476 344 aaKnown RBP7.62□□□□□ -1.19
ATG8YBL078C COQ8P27697 501 aa7.58□□□□□ -1.2
ATG8YBL078C EDS1P38073 919 aa7.58□□□□□ -1.2
ATG8YBL078C RTG1P32607 177 aa7.57□□□□□ -1.2
ATG8YBL078C HTA1P04911 132 aaKnown RBP7.56□□□□□ -1.2
ATG8YBL078C HTA2P04912 132 aa7.56□□□□□ -1.2
ATG8YBL078C PTC3P34221 468 aaKnown RBP7.56□□□□□ -1.2
ATG8YBL078C DCW1P36091 449 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms