RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeastyeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDH1YBR204C MTC1P47018 478 aaKnown RBP16.22■□□□□ 0.19
LDH1YBR204C DRS1P32892 752 aaKnown RBP15.13■□□□□ 0.01
LDH1YBR204C FAP1P53971 965 aa14.72□□□□□ -0.05
LDH1YBR204C PRY3P47033 881 aa13.8□□□□□ -0.2
LDH1YBR204C PRI1P10363 409 aa13.69□□□□□ -0.22
LDH1YBR204C AAD16Q02895 342 aa13.64□□□□□ -0.23
LDH1YBR204C ISW2Q08773 1120 aa13.51□□□□□ -0.25
LDH1YBR204C RPG1P38249 964 aaKnown RBP13.33□□□□□ -0.28
LDH1YBR204C DIP2Q12220 943 aaPredicted RBP13.27□□□□□ -0.29
LDH1YBR204C YCK3P39962 524 aa12.95□□□□□ -0.34
LDH1YBR204C TSR3Q12094 313 aaKnown RBP12.95□□□□□ -0.34
LDH1YBR204C HAA1Q12753 694 aaKnown RBP12.95□□□□□ -0.34
LDH1YBR204C RSE1Q04693 1361 aaKnown RBP12.86□□□□□ -0.35
LDH1YBR204C AVT3P36062 692 aa12.74□□□□□ -0.37
LDH1YBR204C BFR2Q06631 534 aaKnown RBP12.57□□□□□ -0.4
LDH1YBR204C MRPL32P25348 183 aa12.49□□□□□ -0.41
LDH1YBR204C RPL17AP05740 184 aaKnown RBP12.45□□□□□ -0.42
LDH1YBR204C RPL17BP46990 184 aaKnown RBP12.45□□□□□ -0.42
LDH1YBR204C REB1P21538 810 aa12.44□□□□□ -0.42
LDH1YBR204C YGL015CP33199 130 aa11.98□□□□□ -0.49
LDH1YBR204C SPT21P35209 758 aa11.84□□□□□ -0.51
LDH1YBR204C CDC27P38042 758 aa11.77□□□□□ -0.53
LDH1YBR204C YKR023WP36119 530 aaKnown RBP11.73□□□□□ -0.53
LDH1YBR204C HOP09932 586 aa11.53□□□□□ -0.56
LDH1YBR204C TFC8Q12308 588 aa11.51□□□□□ -0.57
LDH1YBR204C UBP10P53874 792 aaPredicted RBP11.5□□□□□ -0.57
LDH1YBR204C DCD1P06773 312 aa11.46□□□□□ -0.57
LDH1YBR204C RIM101P33400 625 aa11.44□□□□□ -0.58
LDH1YBR204C MAP2P38174 421 aaKnown RBP11.44□□□□□ -0.58
LDH1YBR204C BUD31P25337 157 aaPredicted RBP11.3□□□□□ -0.6
LDH1YBR204C SCY1P53009 804 aa11.23□□□□□ -0.61
LDH1YBR204C BCH2P36122 765 aa11.13□□□□□ -0.63
LDH1YBR204C SLX5P32828 619 aaKnown RBP11.1□□□□□ -0.63
LDH1YBR204C TIF4632P39936 914 aaKnown RBP11.08□□□□□ -0.64
LDH1YBR204C OXP1P28273 1286 aa11.03□□□□□ -0.64
LDH1YBR204C TGL3P40308 642 aa10.98□□□□□ -0.65
LDH1YBR204C YIL055CP40523 627 aaKnown RBP10.98□□□□□ -0.65
LDH1YBR204C TFA1P36100 482 aa10.97□□□□□ -0.65
LDH1YBR204C PTP3P40048 928 aa10.97□□□□□ -0.65
LDH1YBR204C EPS1P40557 701 aa10.87□□□□□ -0.67
LDH1YBR204C BDF1P35817 686 aa10.82□□□□□ -0.68
LDH1YBR204C RSM7P47150 247 aa10.77□□□□□ -0.69
LDH1YBR204C YAH1Q12184 172 aaKnown RBP10.77□□□□□ -0.69
LDH1YBR204C BBC1P47068 1157 aa10.74□□□□□ -0.69
LDH1YBR204C UBP9P39967 754 aa10.72□□□□□ -0.69
LDH1YBR204C AI2P03876 854 aa10.67□□□□□ -0.7
LDH1YBR204C SIS1P25294 352 aaKnown RBP10.58□□□□□ -0.72
LDH1YBR204C YLR271WQ06152 274 aa10.54□□□□□ -0.72
LDH1YBR204C YOR238WQ08634 303 aa10.51□□□□□ -0.73
LDH1YBR204C MST1P07236 462 aa10.47□□□□□ -0.73
LDH1YBR204C NSR1P27476 414 aaKnown RBP RIP-Chip data10.47□□□□□ -0.73not detected
LDH1YBR204C SSP1P38871 571 aa10.44□□□□□ -0.74
LDH1YBR204C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
LDH1YBR204C YAP5P40574 245 aa10.43□□□□□ -0.74
LDH1YBR204C PSD2P53037 1138 aaKnown RBP10.39□□□□□ -0.75
LDH1YBR204C YBL029C-AQ3E756 94 aa10.35□□□□□ -0.75
LDH1YBR204C MRM1P25270 412 aa10.28□□□□□ -0.76
LDH1YBR204C GTT3P39996 337 aa10.24□□□□□ -0.77
LDH1YBR204C VNX1P42839 908 aa10.23□□□□□ -0.77
LDH1YBR204C WSC3Q12215 556 aa10.22□□□□□ -0.77
LDH1YBR204C MGA2P40578 1113 aa10.2□□□□□ -0.78
LDH1YBR204C SPP1Q03012 353 aa10.18□□□□□ -0.78
LDH1YBR204C CST9Q06032 482 aa10.17□□□□□ -0.78
LDH1YBR204C PIB1Q06651 286 aa10.15□□□□□ -0.78
LDH1YBR204C RTG3P38165 486 aa10.08□□□□□ -0.8
LDH1YBR204C TIF11P38912 153 aaKnown RBP10.08□□□□□ -0.8
LDH1YBR204C YMR1P47147 688 aaKnown RBP RIP-Chip data10.06□□□□□ -0.8not detected
LDH1YBR204C VPS29P38759 282 aa10.02□□□□□ -0.81
LDH1YBR204C DBP1P24784 617 aaKnown RBP10□□□□□ -0.81
LDH1YBR204C YFR006WP43590 535 aa9.96□□□□□ -0.82
LDH1YBR204C ULI1P43604 169 aa9.96□□□□□ -0.82
LDH1YBR204C MSB4Q12317 492 aa9.96□□□□□ -0.82
LDH1YBR204C RCR1P38212 213 aa9.92□□□□□ -0.82
LDH1YBR204C STS1P38637 319 aa9.92□□□□□ -0.82
LDH1YBR204C LDB19Q12502 818 aa9.92□□□□□ -0.82
LDH1YBR204C EAP1P36041 632 aaKnown RBP9.91□□□□□ -0.82
LDH1YBR204C FKH1P40466 484 aa9.9□□□□□ -0.82
LDH1YBR204C YOL036WQ08206 761 aa9.9□□□□□ -0.82
LDH1YBR204C VMA1P17255 1071 aaKnown RBP9.89□□□□□ -0.83
LDH1YBR204C SET4P42948 560 aa9.89□□□□□ -0.83
LDH1YBR204C YJL171CP46992 396 aa9.89□□□□□ -0.83
LDH1YBR204C AIR2Q12476 344 aaKnown RBP9.89□□□□□ -0.83
LDH1YBR204C IOC2Q12072 812 aa9.88□□□□□ -0.83
LDH1YBR204C SAM3Q08986 587 aa9.81□□□□□ -0.84
LDH1YBR204C TRP5P00931 707 aaKnown RBP9.8□□□□□ -0.84
LDH1YBR204C RTG1P32607 177 aa9.75□□□□□ -0.85
LDH1YBR204C BMT6Q12291 365 aa9.74□□□□□ -0.85
LDH1YBR204C GYP5Q12344 894 aa9.72□□□□□ -0.85
LDH1YBR204C ABP1P15891 592 aaKnown RBP9.71□□□□□ -0.86
LDH1YBR204C YNL035CP53962 389 aaKnown RBP9.71□□□□□ -0.86
LDH1YBR204C NCR1Q12200 1170 aa9.69□□□□□ -0.86
LDH1YBR204C SEC61P32915 480 aa9.67□□□□□ -0.86
LDH1YBR204C HTA1P04911 132 aaKnown RBP9.65□□□□□ -0.86
LDH1YBR204C HTA2P04912 132 aa9.65□□□□□ -0.86
LDH1YBR204C MAK11P20484 414 aaKnown RBP9.64□□□□□ -0.87
LDH1YBR204C TFG1P41895 735 aaPredicted RBP9.64□□□□□ -0.87
LDH1YBR204C RAM2P29703 316 aa9.63□□□□□ -0.87
LDH1YBR204C DCW1P36091 449 aa9.63□□□□□ -0.87
LDH1YBR204C MIF2P35201 549 aa9.62□□□□□ -0.87
LDH1YBR204C JIP4Q03361 876 aa9.62□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms