RNA–Protein interactions for RNA: YLR453C

RIF2, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF2YLR453C FAP1P53971 965 aa14.98□□□□□ -0.01
RIF2YLR453C MTC1P47018 478 aaKnown RBP14.77□□□□□ -0.05
RIF2YLR453C PRY3P47033 881 aa14.16□□□□□ -0.14
RIF2YLR453C DRS1P32892 752 aaKnown RBP13.57□□□□□ -0.24
RIF2YLR453C AAD16Q02895 342 aa13.33□□□□□ -0.28
RIF2YLR453C YCK3P39962 524 aa13.31□□□□□ -0.28
RIF2YLR453C HAA1Q12753 694 aaKnown RBP13.25□□□□□ -0.29
RIF2YLR453C PRI1P10363 409 aa13.17□□□□□ -0.3
RIF2YLR453C ISW2Q08773 1120 aa12.33□□□□□ -0.44
RIF2YLR453C TSR3Q12094 313 aaKnown RBP12.29□□□□□ -0.44
RIF2YLR453C RPG1P38249 964 aaKnown RBP12.22□□□□□ -0.45
RIF2YLR453C DIP2Q12220 943 aaPredicted RBP11.98□□□□□ -0.49
RIF2YLR453C YGL015CP33199 130 aa11.94□□□□□ -0.5
RIF2YLR453C MRPL32P25348 183 aa11.87□□□□□ -0.51
RIF2YLR453C BUD31P25337 157 aaPredicted RBP11.77□□□□□ -0.53
RIF2YLR453C RSE1Q04693 1361 aaKnown RBP11.65□□□□□ -0.55
RIF2YLR453C AVT3P36062 692 aa11.51□□□□□ -0.57
RIF2YLR453C BFR2Q06631 534 aaKnown RBP11.32□□□□□ -0.6
RIF2YLR453C RPL17AP05740 184 aaKnown RBP11.29□□□□□ -0.6
RIF2YLR453C RPL17BP46990 184 aaKnown RBP11.29□□□□□ -0.6
RIF2YLR453C REB1P21538 810 aa11.25□□□□□ -0.61
RIF2YLR453C SIS1P25294 352 aaKnown RBP10.99□□□□□ -0.65
RIF2YLR453C UBP10P53874 792 aaPredicted RBP10.93□□□□□ -0.66
RIF2YLR453C CDC27P38042 758 aa10.9□□□□□ -0.66
RIF2YLR453C SPT21P35209 758 aa10.8□□□□□ -0.68
RIF2YLR453C MAP2P38174 421 aaKnown RBP10.79□□□□□ -0.68
RIF2YLR453C UBP9P39967 754 aa10.73□□□□□ -0.69
RIF2YLR453C YKR023WP36119 530 aaKnown RBP10.72□□□□□ -0.69
RIF2YLR453C TFA1P36100 482 aa10.66□□□□□ -0.7
RIF2YLR453C TFC8Q12308 588 aa10.51□□□□□ -0.73
RIF2YLR453C HOP09932 586 aa10.49□□□□□ -0.73
RIF2YLR453C TIF4632P39936 914 aaKnown RBP10.49□□□□□ -0.73
RIF2YLR453C TGL3P40308 642 aa10.48□□□□□ -0.73
RIF2YLR453C DCD1P06773 312 aa10.44□□□□□ -0.74
RIF2YLR453C RIM101P33400 625 aa10.38□□□□□ -0.75
RIF2YLR453C SLX5P32828 619 aaKnown RBP10.26□□□□□ -0.77
RIF2YLR453C SCY1P53009 804 aa10.23□□□□□ -0.77
RIF2YLR453C BCH2P36122 765 aa10.15□□□□□ -0.78
RIF2YLR453C OXP1P28273 1286 aa10.01□□□□□ -0.81
RIF2YLR453C YBL029C-AQ3E756 94 aa9.89□□□□□ -0.83
RIF2YLR453C EPS1P40557 701 aa9.88□□□□□ -0.83
RIF2YLR453C YIL055CP40523 627 aaKnown RBP9.86□□□□□ -0.83
RIF2YLR453C BDF1P35817 686 aa9.85□□□□□ -0.83
RIF2YLR453C PTP3P40048 928 aa9.85□□□□□ -0.83
RIF2YLR453C MST1P07236 462 aa9.84□□□□□ -0.83
RIF2YLR453C VNX1P42839 908 aa9.74□□□□□ -0.85
RIF2YLR453C RSM7P47150 247 aa9.72□□□□□ -0.85
RIF2YLR453C YJL171CP46992 396 aa9.68□□□□□ -0.86
RIF2YLR453C BBC1P47068 1157 aa9.68□□□□□ -0.86
RIF2YLR453C YOR238WQ08634 303 aa9.67□□□□□ -0.86
RIF2YLR453C YAH1Q12184 172 aaKnown RBP9.67□□□□□ -0.86
RIF2YLR453C AIR2Q12476 344 aaKnown RBP9.67□□□□□ -0.86
RIF2YLR453C AI2P03876 854 aa9.65□□□□□ -0.86
RIF2YLR453C SPP1Q03012 353 aa9.63□□□□□ -0.87
RIF2YLR453C FKH1P40466 484 aa9.58□□□□□ -0.88
RIF2YLR453C NSR1P27476 414 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
RIF2YLR453C YLR271WQ06152 274 aa9.53□□□□□ -0.88
RIF2YLR453C YAP5P40574 245 aa9.48□□□□□ -0.89
RIF2YLR453C TIF11P38912 153 aaKnown RBP9.43□□□□□ -0.9
RIF2YLR453C WSC3Q12215 556 aa9.43□□□□□ -0.9
RIF2YLR453C PSD2P53037 1138 aaKnown RBP9.42□□□□□ -0.9
RIF2YLR453C BMT6Q12291 365 aa9.4□□□□□ -0.9
RIF2YLR453C SSP1P38871 571 aa9.35□□□□□ -0.91
RIF2YLR453C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.32□□□□□ -0.92not detected
RIF2YLR453C MRM1P25270 412 aa9.29□□□□□ -0.92
RIF2YLR453C LDB19Q12502 818 aa9.28□□□□□ -0.92
RIF2YLR453C GTT3P39996 337 aa9.26□□□□□ -0.93
RIF2YLR453C PIB1Q06651 286 aa9.2□□□□□ -0.94
RIF2YLR453C IOC2Q12072 812 aa9.2□□□□□ -0.94
RIF2YLR453C ULI1P43604 169 aa9.18□□□□□ -0.94
RIF2YLR453C CST9Q06032 482 aa9.17□□□□□ -0.94
RIF2YLR453C MGA2P40578 1113 aa9.15□□□□□ -0.94
RIF2YLR453C VPS29P38759 282 aa9.09□□□□□ -0.95
RIF2YLR453C YMR1P47147 688 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
RIF2YLR453C RTG3P38165 486 aa9.08□□□□□ -0.96
RIF2YLR453C RQC2Q12532 1038 aaKnown RBP9.06□□□□□ -0.96
RIF2YLR453C DBP1P24784 617 aaKnown RBP9.05□□□□□ -0.96
RIF2YLR453C MSB4Q12317 492 aa9.05□□□□□ -0.96
RIF2YLR453C YFR006WP43590 535 aa9.02□□□□□ -0.97
RIF2YLR453C STS1P38637 319 aa9.01□□□□□ -0.97
RIF2YLR453C RGA2Q06407 1009 aa9.01□□□□□ -0.97
RIF2YLR453C EAP1P36041 632 aaKnown RBP9□□□□□ -0.97
RIF2YLR453C YOL036WQ08206 761 aa9□□□□□ -0.97
RIF2YLR453C SET4P42948 560 aa8.98□□□□□ -0.97
RIF2YLR453C VMA1P17255 1071 aaKnown RBP8.97□□□□□ -0.97
RIF2YLR453C RCR1P38212 213 aa8.97□□□□□ -0.97
RIF2YLR453C RTG1P32607 177 aa8.94□□□□□ -0.98
RIF2YLR453C SAM3Q08986 587 aa8.94□□□□□ -0.98
RIF2YLR453C NCR1Q12200 1170 aa8.94□□□□□ -0.98
RIF2YLR453C TRP5P00931 707 aaKnown RBP8.93□□□□□ -0.98
RIF2YLR453C BCK2P33306 851 aa8.91□□□□□ -0.98
RIF2YLR453C SEC61P32915 480 aa8.85□□□□□ -0.99
RIF2YLR453C YNL035CP53962 389 aaKnown RBP8.85□□□□□ -0.99
RIF2YLR453C ABP1P15891 592 aaKnown RBP8.79□□□□□ -1
RIF2YLR453C GYP5Q12344 894 aa8.79□□□□□ -1
RIF2YLR453C DAN4P47179 1161 aa8.74□□□□□ -1.01
RIF2YLR453C JIP4Q03361 876 aa8.74□□□□□ -1.01
RIF2YLR453C CHL1P22516 861 aaPredicted RBP8.73□□□□□ -1.01
RIF2YLR453C HTA1P04911 132 aaKnown RBP8.72□□□□□ -1.01
RIF2YLR453C HTA2P04912 132 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms