RNA–Protein interactions for RNA: YOR256C

TRE2, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE2, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE2YOR256C DRS1P32892 752 aaKnown RBP11.69□□□□□ -0.54
TRE2YOR256C MTC1P47018 478 aaKnown RBP11.35□□□□□ -0.59
TRE2YOR256C BFR2Q06631 534 aaKnown RBP10.26□□□□□ -0.77
TRE2YOR256C TFA1P36100 482 aa10.02□□□□□ -0.81
TRE2YOR256C AVT3P36062 692 aa9.93□□□□□ -0.82
TRE2YOR256C DIP2Q12220 943 aaPredicted RBP9.86□□□□□ -0.83
TRE2YOR256C RSE1Q04693 1361 aaKnown RBP9.16□□□□□ -0.94
TRE2YOR256C ISW2Q08773 1120 aa9.06□□□□□ -0.96
TRE2YOR256C RPG1P38249 964 aaKnown RBP8.96□□□□□ -0.97
TRE2YOR256C PRI1P10363 409 aa8.93□□□□□ -0.98
TRE2YOR256C RPL17AP05740 184 aaKnown RBP8.79□□□□□ -1
TRE2YOR256C RPL17BP46990 184 aaKnown RBP8.79□□□□□ -1
TRE2YOR256C FAP1P53971 965 aa8.73□□□□□ -1.01
TRE2YOR256C RQC2Q12532 1038 aaKnown RBP8.66□□□□□ -1.02
TRE2YOR256C SPT21P35209 758 aa8.65□□□□□ -1.02
TRE2YOR256C AAD16Q02895 342 aa8.64□□□□□ -1.03
TRE2YOR256C REB1P21538 810 aa8.6□□□□□ -1.03
TRE2YOR256C RIM101P33400 625 aa8.58□□□□□ -1.04
TRE2YOR256C TSR3Q12094 313 aaKnown RBP8.43□□□□□ -1.06
TRE2YOR256C PTP3P40048 928 aa8.4□□□□□ -1.07
TRE2YOR256C OXP1P28273 1286 aa8.34□□□□□ -1.07
TRE2YOR256C DMA1P38823 416 aa8.33□□□□□ -1.08
TRE2YOR256C SSP1P38871 571 aa8.3□□□□□ -1.08
TRE2YOR256C YKR023WP36119 530 aaKnown RBP8.27□□□□□ -1.09
TRE2YOR256C PRY3P47033 881 aa8.19□□□□□ -1.1
TRE2YOR256C YLR271WQ06152 274 aa8.15□□□□□ -1.1
TRE2YOR256C YAH1Q12184 172 aaKnown RBP8.11□□□□□ -1.11
TRE2YOR256C TFC8Q12308 588 aa8.07□□□□□ -1.12
TRE2YOR256C YIL055CP40523 627 aaKnown RBP8.05□□□□□ -1.12
TRE2YOR256C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
TRE2YOR256C MRPL32P25348 183 aa8.03□□□□□ -1.12
TRE2YOR256C HOP09932 586 aa8.02□□□□□ -1.13
TRE2YOR256C YCK3P39962 524 aa8.01□□□□□ -1.13
TRE2YOR256C RSM7P47150 247 aa8□□□□□ -1.13
TRE2YOR256C CDC27P38042 758 aa7.98□□□□□ -1.13
TRE2YOR256C MGA2P40578 1113 aa7.98□□□□□ -1.13
TRE2YOR256C DCD1P06773 312 aa7.98□□□□□ -1.13
TRE2YOR256C PSD2P53037 1138 aaKnown RBP7.93□□□□□ -1.14
TRE2YOR256C CST9Q06032 482 aa7.93□□□□□ -1.14
TRE2YOR256C SAS10Q12136 610 aaPredicted RBP7.9□□□□□ -1.15
TRE2YOR256C BCH2P36122 765 aa7.86□□□□□ -1.15
TRE2YOR256C AI2P03876 854 aa7.85□□□□□ -1.15
TRE2YOR256C LEO1P38439 464 aa7.79□□□□□ -1.16
TRE2YOR256C HAA1Q12753 694 aaKnown RBP7.77□□□□□ -1.17
TRE2YOR256C TAF7Q05021 590 aa7.76□□□□□ -1.17
TRE2YOR256C LEU3P08638 886 aa7.72□□□□□ -1.17
TRE2YOR256C EPS1P40557 701 aa7.71□□□□□ -1.18
TRE2YOR256C BBC1P47068 1157 aa7.7□□□□□ -1.18
TRE2YOR256C RAM2P29703 316 aa7.7□□□□□ -1.18
TRE2YOR256C BDF1P35817 686 aa7.67□□□□□ -1.18
TRE2YOR256C RCR1P38212 213 aa7.65□□□□□ -1.18
TRE2YOR256C MRM1P25270 412 aa7.61□□□□□ -1.19
TRE2YOR256C SCY1P53009 804 aa7.58□□□□□ -1.2
TRE2YOR256C YPR148CQ06523 435 aa7.58□□□□□ -1.2
TRE2YOR256C SET1P38827 1080 aaKnown RBP7.56□□□□□ -1.2
TRE2YOR256C UBP10P53874 792 aaPredicted RBP7.56□□□□□ -1.2
TRE2YOR256C MAP2P38174 421 aaKnown RBP7.56□□□□□ -1.2
TRE2YOR256C RTG3P38165 486 aa7.53□□□□□ -1.2
TRE2YOR256C MAK11P20484 414 aaKnown RBP7.51□□□□□ -1.21
TRE2YOR256C VPS29P38759 282 aa7.5□□□□□ -1.21
TRE2YOR256C CKB1P43639 278 aa7.44□□□□□ -1.22
TRE2YOR256C IFH1P39520 1085 aa7.43□□□□□ -1.22
TRE2YOR256C VPS70P47161 811 aa7.43□□□□□ -1.22
TRE2YOR256C YGL015CP33199 130 aa7.41□□□□□ -1.22
TRE2YOR256C RPN1P38764 993 aaKnown RBP7.41□□□□□ -1.22
TRE2YOR256C SLX5P32828 619 aaKnown RBP7.4□□□□□ -1.23
TRE2YOR256C COQ8P27697 501 aa7.39□□□□□ -1.23
TRE2YOR256C STS1P38637 319 aa7.39□□□□□ -1.23
TRE2YOR256C DSF2P38213 736 aa7.38□□□□□ -1.23
TRE2YOR256C NOP53Q12080 455 aaKnown RBP7.37□□□□□ -1.23
TRE2YOR256C EDS1P38073 919 aa7.35□□□□□ -1.23
TRE2YOR256C YMR1P47147 688 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
TRE2YOR256C SPB4P25808 606 aaPredicted RBP7.33□□□□□ -1.24
TRE2YOR256C PBS2P08018 668 aa7.3□□□□□ -1.24
TRE2YOR256C NSR1P27476 414 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
TRE2YOR256C DBP1P24784 617 aaKnown RBP7.29□□□□□ -1.24
TRE2YOR256C DMA2P53924 522 aa7.27□□□□□ -1.25
TRE2YOR256C YFR006WP43590 535 aa7.26□□□□□ -1.25
TRE2YOR256C YOR238WQ08634 303 aa7.25□□□□□ -1.25
TRE2YOR256C MIF2P35201 549 aa7.25□□□□□ -1.25
TRE2YOR256C PTC3P34221 468 aaKnown RBP7.23□□□□□ -1.25
TRE2YOR256C ABP1P15891 592 aaKnown RBP7.22□□□□□ -1.25
TRE2YOR256C REF2P42073 533 aaPredicted RBP7.22□□□□□ -1.25
TRE2YOR256C YNR021WP53723 404 aaKnown RBP7.22□□□□□ -1.25
TRE2YOR256C NUP42P49686 430 aaKnown RBP7.21□□□□□ -1.25
TRE2YOR256C MAM3Q12296 706 aa7.18□□□□□ -1.26
TRE2YOR256C TGL3P40308 642 aa7.18□□□□□ -1.26
TRE2YOR256C COX6P00427 148 aa7.16□□□□□ -1.26
TRE2YOR256C VMA1P17255 1071 aaKnown RBP7.16□□□□□ -1.26
TRE2YOR256C DIT2P21595 489 aa7.16□□□□□ -1.26
TRE2YOR256C TIF4632P39936 914 aaKnown RBP7.16□□□□□ -1.26
TRE2YOR256C YAP5P40574 245 aa7.16□□□□□ -1.26
TRE2YOR256C AIM7Q12156 149 aa7.16□□□□□ -1.26
TRE2YOR256C IES2P40154 320 aa7.16□□□□□ -1.26
TRE2YOR256C KIN1P13185 1064 aa7.15□□□□□ -1.26
TRE2YOR256C MAK21Q12176 1025 aaKnown RBP7.15□□□□□ -1.26
TRE2YOR256C YDR090CQ03193 310 aa7.14□□□□□ -1.27
TRE2YOR256C GLC3P32775 704 aa7.13□□□□□ -1.27
TRE2YOR256C UBP14P38237 781 aaKnown RBP7.12□□□□□ -1.27
TRE2YOR256C PIB1Q06651 286 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms