RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeastyeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTK1YDL025C DRS1P32892 752 aaKnown RBP11.31□□□□□ -0.6
RTK1YDL025C MTC1P47018 478 aaKnown RBP11.01□□□□□ -0.65
RTK1YDL025C BFR2Q06631 534 aaKnown RBP10.07□□□□□ -0.8
RTK1YDL025C TFA1P36100 482 aa9.87□□□□□ -0.83
RTK1YDL025C AVT3P36062 692 aa9.42□□□□□ -0.9
RTK1YDL025C DIP2Q12220 943 aaPredicted RBP9.41□□□□□ -0.9
RTK1YDL025C FAP1P53971 965 aa9.11□□□□□ -0.95
RTK1YDL025C RQC2Q12532 1038 aaKnown RBP9.08□□□□□ -0.96
RTK1YDL025C PRI1P10363 409 aa8.97□□□□□ -0.97
RTK1YDL025C ISW2Q08773 1120 aa8.92□□□□□ -0.98
RTK1YDL025C RPG1P38249 964 aaKnown RBP8.85□□□□□ -0.99
RTK1YDL025C AAD16Q02895 342 aa8.8□□□□□ -1
RTK1YDL025C RSE1Q04693 1361 aaKnown RBP8.78□□□□□ -1
RTK1YDL025C PRY3P47033 881 aa8.57□□□□□ -1.04
RTK1YDL025C RPL17AP05740 184 aaKnown RBP8.47□□□□□ -1.05
RTK1YDL025C RPL17BP46990 184 aaKnown RBP8.47□□□□□ -1.05
RTK1YDL025C TSR3Q12094 313 aaKnown RBP8.46□□□□□ -1.06
RTK1YDL025C DMA1P38823 416 aa8.43□□□□□ -1.06
RTK1YDL025C REB1P21538 810 aa8.32□□□□□ -1.08
RTK1YDL025C YCK3P39962 524 aa8.32□□□□□ -1.08
RTK1YDL025C PTP3P40048 928 aa8.27□□□□□ -1.09
RTK1YDL025C SPT21P35209 758 aa8.26□□□□□ -1.09
RTK1YDL025C TAF7Q05021 590 aa8.21□□□□□ -1.09
RTK1YDL025C HAA1Q12753 694 aaKnown RBP8.12□□□□□ -1.11
RTK1YDL025C MRPL32P25348 183 aa8.09□□□□□ -1.12
RTK1YDL025C RIM101P33400 625 aa8.09□□□□□ -1.12
RTK1YDL025C YKR023WP36119 530 aaKnown RBP8.02□□□□□ -1.12
RTK1YDL025C SSP1P38871 571 aa8.02□□□□□ -1.12
RTK1YDL025C LEO1P38439 464 aa7.97□□□□□ -1.13
RTK1YDL025C CDC27P38042 758 aa7.89□□□□□ -1.15
RTK1YDL025C YAH1Q12184 172 aaKnown RBP7.88□□□□□ -1.15
RTK1YDL025C OXP1P28273 1286 aa7.86□□□□□ -1.15
RTK1YDL025C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
RTK1YDL025C TFC8Q12308 588 aa7.84□□□□□ -1.15
RTK1YDL025C YIL055CP40523 627 aaKnown RBP7.79□□□□□ -1.16
RTK1YDL025C HOP09932 586 aa7.79□□□□□ -1.16
RTK1YDL025C YLR271WQ06152 274 aa7.75□□□□□ -1.17
RTK1YDL025C DCD1P06773 312 aa7.75□□□□□ -1.17
RTK1YDL025C SAS10Q12136 610 aaPredicted RBP7.7□□□□□ -1.18
RTK1YDL025C LEU3P08638 886 aa7.69□□□□□ -1.18
RTK1YDL025C MGA2P40578 1113 aa7.67□□□□□ -1.18
RTK1YDL025C RSM7P47150 247 aa7.63□□□□□ -1.19
RTK1YDL025C YGL015CP33199 130 aa7.62□□□□□ -1.19
RTK1YDL025C BCH2P36122 765 aa7.6□□□□□ -1.19
RTK1YDL025C CST9Q06032 482 aa7.56□□□□□ -1.2
RTK1YDL025C UBP10P53874 792 aaPredicted RBP7.55□□□□□ -1.2
RTK1YDL025C MAP2P38174 421 aaKnown RBP7.53□□□□□ -1.2
RTK1YDL025C RPN1P38764 993 aaKnown RBP7.46□□□□□ -1.22
RTK1YDL025C SCY1P53009 804 aa7.46□□□□□ -1.22
RTK1YDL025C PSD2P53037 1138 aaKnown RBP7.46□□□□□ -1.22
RTK1YDL025C AI2P03876 854 aa7.45□□□□□ -1.22
RTK1YDL025C EPS1P40557 701 aa7.43□□□□□ -1.22
RTK1YDL025C DMA2P53924 522 aa7.43□□□□□ -1.22
RTK1YDL025C SPB4P25808 606 aaPredicted RBP7.4□□□□□ -1.23
RTK1YDL025C BDF1P35817 686 aa7.4□□□□□ -1.23
RTK1YDL025C BBC1P47068 1157 aa7.37□□□□□ -1.23
RTK1YDL025C SET1P38827 1080 aaKnown RBP7.36□□□□□ -1.23
RTK1YDL025C RAM2P29703 316 aa7.35□□□□□ -1.23
RTK1YDL025C VPS70P47161 811 aa7.34□□□□□ -1.23
RTK1YDL025C CKB1P43639 278 aa7.33□□□□□ -1.24
RTK1YDL025C SLX5P32828 619 aaKnown RBP7.32□□□□□ -1.24
RTK1YDL025C MRM1P25270 412 aa7.28□□□□□ -1.24
RTK1YDL025C YPR148CQ06523 435 aa7.28□□□□□ -1.24
RTK1YDL025C IFH1P39520 1085 aa7.26□□□□□ -1.25
RTK1YDL025C RCR1P38212 213 aa7.25□□□□□ -1.25
RTK1YDL025C BUD31P25337 157 aaPredicted RBP7.23□□□□□ -1.25
RTK1YDL025C RLF2Q12495 606 aa7.22□□□□□ -1.25
RTK1YDL025C RTG3P38165 486 aa7.21□□□□□ -1.26
RTK1YDL025C TGL3P40308 642 aa7.2□□□□□ -1.26
RTK1YDL025C MAK11P20484 414 aaKnown RBP7.17□□□□□ -1.26
RTK1YDL025C PBS2P08018 668 aa7.17□□□□□ -1.26
RTK1YDL025C ABP1P15891 592 aaKnown RBP7.17□□□□□ -1.26
RTK1YDL025C DSF2P38213 736 aa7.17□□□□□ -1.26
RTK1YDL025C TIF4632P39936 914 aaKnown RBP7.17□□□□□ -1.26
RTK1YDL025C KIN1P13185 1064 aa7.13□□□□□ -1.27
RTK1YDL025C NSR1P27476 414 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
RTK1YDL025C YNR021WP53723 404 aaKnown RBP7.11□□□□□ -1.27
RTK1YDL025C COQ8P27697 501 aa7.09□□□□□ -1.28
RTK1YDL025C VPS29P38759 282 aa7.09□□□□□ -1.28
RTK1YDL025C MAM3Q12296 706 aa7.07□□□□□ -1.28
RTK1YDL025C GLC3P32775 704 aa7.07□□□□□ -1.28
RTK1YDL025C HGH1P48362 394 aaKnown RBP7.07□□□□□ -1.28
RTK1YDL025C MST1P07236 462 aa7.04□□□□□ -1.28
RTK1YDL025C REF2P42073 533 aaPredicted RBP7.03□□□□□ -1.28
RTK1YDL025C IES2P40154 320 aa7.02□□□□□ -1.28
RTK1YDL025C AIM7Q12156 149 aa7.02□□□□□ -1.28
RTK1YDL025C MIF2P35201 549 aa7.02□□□□□ -1.29
RTK1YDL025C DIT2P21595 489 aa7.01□□□□□ -1.29
RTK1YDL025C NOP53Q12080 455 aaKnown RBP7.01□□□□□ -1.29
RTK1YDL025C YAP5P40574 245 aa6.98□□□□□ -1.29
RTK1YDL025C NUP42P49686 430 aaKnown RBP6.98□□□□□ -1.29
RTK1YDL025C STS1P38637 319 aa6.98□□□□□ -1.29
RTK1YDL025C YMR1P47147 688 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
RTK1YDL025C GUA1P38625 525 aaKnown RBP6.97□□□□□ -1.29
RTK1YDL025C ATF2P53296 535 aa6.96□□□□□ -1.29
RTK1YDL025C EDS1P38073 919 aa6.96□□□□□ -1.3
RTK1YDL025C YOR238WQ08634 303 aa6.95□□□□□ -1.3
RTK1YDL025C DBP1P24784 617 aaKnown RBP6.94□□□□□ -1.3
RTK1YDL025C MAK21Q12176 1025 aaKnown RBP6.94□□□□□ -1.3
RTK1YDL025C COX6P00427 148 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 64.4 ms