Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 PMT4YJR143C 2289 nt5.54□□□□□ -1.52
MSH4P40965 SPO23YBR250W 1572 nt5.54□□□□□ -1.52
MSH4P40965 SMF1YOL122C 1728 nt5.54□□□□□ -1.52
MSH4P40965 YDR261C-DYDR261C-D 4815 nt5.54□□□□□ -1.52
MSH4P40965 RCM1YNL022C 1473 nt5.53□□□□□ -1.52
MSH4P40965 YPS7YDR349C 1791 nt5.53□□□□□ -1.52
MSH4P40965 PPH3YDR075W 927 nt5.53□□□□□ -1.52
MSH4P40965 YDR157WYDR157W 402 nt5.53□□□□□ -1.52
MSH4P40965 SUR2YDR297W 1050 nt5.53□□□□□ -1.52
MSH4P40965 YGL159WYGL159W 1113 nt5.53□□□□□ -1.52
MSH4P40965 SCM4YGR049W 564 nt5.53□□□□□ -1.52
MSH4P40965 MRP49YKL167C 414 nt5.53□□□□□ -1.52
MSH4P40965 CDC123YLR215C 1083 nt5.53□□□□□ -1.52
MSH4P40965 YOL159C-AYOL159C-A 273 nt5.53□□□□□ -1.52
MSH4P40965 YCL021W-AYCL021W-A 378 nt5.53□□□□□ -1.52
MSH4P40965 RPN4YDL020C 1596 nt5.53□□□□□ -1.52
MSH4P40965 ITT1YML068W 1395 nt5.53□□□□□ -1.52
MSH4P40965 MDR1YGR100W 2853 nt5.53□□□□□ -1.52
MSH4P40965 TRE1YPL176C 2352 nt5.52□□□□□ -1.53
MSH4P40965 TFA1YKL028W 1449 nt5.52□□□□□ -1.53
MSH4P40965 YJL007CYJL007C 315 nt5.52□□□□□ -1.53
MSH4P40965 YJL114WYJL114W 681 nt5.52□□□□□ -1.53
MSH4P40965 CYC1YJR048W 330 nt5.52□□□□□ -1.53
MSH4P40965 YJR141WYJR141W 1044 nt5.52□□□□□ -1.53
MSH4P40965 YNL203CYNL203C 612 nt5.52□□□□□ -1.53
MSH4P40965 ZPS1YOL154W 750 nt5.52□□□□□ -1.53
MSH4P40965 DGA1YOR245C 1257 nt5.52□□□□□ -1.53
MSH4P40965 snR17bsnR17b 332 nt5.52□□□□□ -1.53
MSH4P40965 QCR2YPR191W 1107 nt5.52□□□□□ -1.53
MSH4P40965 PUF2YPR042C 3228 nt5.52□□□□□ -1.53
MSH4P40965 RKM3YBR030W 1659 nt5.52□□□□□ -1.53
MSH4P40965 POL31YJR006W 1464 nt5.51□□□□□ -1.53
MSH4P40965 HSP82YPL240C 2130 nt5.51□□□□□ -1.53
MSH4P40965 FZO1YBR179C 2568 nt5.51□□□□□ -1.53
MSH4P40965 TYW1YPL207W 2433 nt5.51□□□□□ -1.53
MSH4P40965 YCR101CYCR101C 549 nt5.51□□□□□ -1.53
MSH4P40965 SLC1YDL052C 912 nt5.51□□□□□ -1.53
MSH4P40965 RPL13AYDL082W 600 nt5.51□□□□□ -1.53
MSH4P40965 MIX14YDR031W 366 nt5.51□□□□□ -1.53
MSH4P40965 ISC10YER180C 804 nt5.51□□□□□ -1.53
MSH4P40965 AUA1YFL010W-A 285 nt5.51□□□□□ -1.53
MSH4P40965 COS12YGL263W 1143 nt5.51□□□□□ -1.53
MSH4P40965 YGR109W-AYGR109W-A 873 nt5.51□□□□□ -1.53
MSH4P40965 YGR114CYGR114C 390 nt5.51□□□□□ -1.53
MSH4P40965 BET1YIL004C 429 nt5.51□□□□□ -1.53
MSH4P40965 MIX23YBL107C 591 nt5.51□□□□□ -1.53
MSH4P40965 RRG7YOR305W 729 nt5.51□□□□□ -1.53
MSH4P40965 ARX1YDR101C 1782 nt5.51□□□□□ -1.53
MSH4P40965 IMA3YIL172C 1770 nt5.51□□□□□ -1.53
MSH4P40965 IMA4YJL221C 1770 nt5.51□□□□□ -1.53
MSH4P40965 STP4YDL048C 1473 nt5.51□□□□□ -1.53
MSH4P40965 RUD3YOR216C 1455 nt5.51□□□□□ -1.53
MSH4P40965 MIH1YMR036C 1665 nt5.5□□□□□ -1.53
MSH4P40965 YGR266WYGR266W 2106 nt5.5□□□□□ -1.53
MSH4P40965 SWI3YJL176C 2478 nt5.5□□□□□ -1.53
MSH4P40965 ALG2YGL065C 1512 nt5.5□□□□□ -1.53
MSH4P40965 SKM1YOL113W 1968 nt5.5□□□□□ -1.53
MSH4P40965 MSE1YOL033W 1611 nt5.5□□□□□ -1.53
MSH4P40965 YGL041W-AYGL041W-A 465 nt5.5□□□□□ -1.53
MSH4P40965 MST27YGL051W 705 nt5.5□□□□□ -1.53
MSH4P40965 ARC1YGL105W 1131 nt5.5□□□□□ -1.53
MSH4P40965 YGR290WYGR290W 444 nt5.5□□□□□ -1.53
MSH4P40965 RPF1YHR088W 888 nt5.5□□□□□ -1.53
MSH4P40965 SVP26YHR181W 687 nt5.5□□□□□ -1.53
MSH4P40965 MST28YAR033W 705 nt5.5□□□□□ -1.53
MSH4P40965 YLR257WYLR257W 966 nt5.5□□□□□ -1.53
MSH4P40965 YLR347W-AYLR347W-A 141 nt5.5□□□□□ -1.53
MSH4P40965 SAM37YMR060C 984 nt5.5□□□□□ -1.53
MSH4P40965 YNL046WYNL046W 519 nt5.5□□□□□ -1.53
MSH4P40965 YNL324WYNL324W 396 nt5.5□□□□□ -1.53
MSH4P40965 HSH49YOR319W 642 nt5.5□□□□□ -1.53
MSH4P40965 POP7YBR167C 423 nt5.5□□□□□ -1.53
MSH4P40965 ROT2YBR229C 2865 nt5.49□□□□□ -1.53
MSH4P40965 AXL2YIL140W 2472 nt5.49□□□□□ -1.53
MSH4P40965 RUB1YDR139C 234 nt5.49□□□□□ -1.53
MSH4P40965 TFB3YDR460W 966 nt5.49□□□□□ -1.53
MSH4P40965 MXR1YER042W 555 nt5.49□□□□□ -1.53
MSH4P40965 NSA2YER126C 786 nt5.49□□□□□ -1.53
MSH4P40965 PGD1YGL025C 1194 nt5.49□□□□□ -1.53
MSH4P40965 LYS5YGL154C 819 nt5.49□□□□□ -1.53
MSH4P40965 PRP18YGR006W 756 nt5.49□□□□□ -1.53
MSH4P40965 YMR099CYMR099C 894 nt5.49□□□□□ -1.53
MSH4P40965 ATG8YBL078C 354 nt5.49□□□□□ -1.53
MSH4P40965 WRS1YOL097C 1299 nt5.49□□□□□ -1.53
MSH4P40965 YOR034C-AYOR034C-A 243 nt5.49□□□□□ -1.53
MSH4P40965 BMT2YBR141C 1014 nt5.49□□□□□ -1.53
MSH4P40965 YMR102CYMR102C 2505 nt5.49□□□□□ -1.53
MSH4P40965 GAS4YOL132W 1416 nt5.48□□□□□ -1.53
MSH4P40965 PGM2YMR105C 1710 nt5.48□□□□□ -1.53
MSH4P40965 YGL176CYGL176C 1665 nt5.48□□□□□ -1.53
MSH4P40965 THI20YOL055C 1656 nt5.48□□□□□ -1.53
MSH4P40965 YGL109WYGL109W 324 nt5.48□□□□□ -1.53
MSH4P40965 NAT2YGR147C 867 nt5.48□□□□□ -1.53
MSH4P40965 TRX2YGR209C 315 nt5.48□□□□□ -1.53
MSH4P40965 NFU1YKL040C 771 nt5.48□□□□□ -1.53
MSH4P40965 PRX1YBL064C 786 nt5.48□□□□□ -1.53
MSH4P40965 MAP2YBL091C 1266 nt5.48□□□□□ -1.53
MSH4P40965 RIB5YBR256C 717 nt5.48□□□□□ -1.53
MSH4P40965 MIC60YKR016W 1623 nt5.48□□□□□ -1.53
MSH4P40965 NAM9YNL137C 1461 nt5.47□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 71.5 ms