RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C DRS1P32892 752 aaKnown RBP10.57□□□□□ -0.72
TRE1YPL176C MTC1P47018 478 aaKnown RBP10.4□□□□□ -0.74
TRE1YPL176C BFR2Q06631 534 aaKnown RBP9.18□□□□□ -0.94
TRE1YPL176C DIP2Q12220 943 aaPredicted RBP8.95□□□□□ -0.98
TRE1YPL176C AVT3P36062 692 aa8.93□□□□□ -0.98
TRE1YPL176C TFA1P36100 482 aa8.78□□□□□ -1
TRE1YPL176C RSE1Q04693 1361 aaKnown RBP8.37□□□□□ -1.07
TRE1YPL176C RQC2Q12532 1038 aaKnown RBP8.37□□□□□ -1.07
TRE1YPL176C ISW2Q08773 1120 aa8.36□□□□□ -1.07
TRE1YPL176C FAP1P53971 965 aa8.3□□□□□ -1.08
TRE1YPL176C RPG1P38249 964 aaKnown RBP8.29□□□□□ -1.08
TRE1YPL176C PRI1P10363 409 aa8.28□□□□□ -1.08
TRE1YPL176C TAF7Q05021 590 aa8.26□□□□□ -1.09
TRE1YPL176C AAD16Q02895 342 aa8.07□□□□□ -1.12
TRE1YPL176C RPL17AP05740 184 aaKnown RBP8.07□□□□□ -1.12
TRE1YPL176C RPL17BP46990 184 aaKnown RBP8.07□□□□□ -1.12
TRE1YPL176C REB1P21538 810 aa7.92□□□□□ -1.14
TRE1YPL176C SPT21P35209 758 aa7.87□□□□□ -1.15
TRE1YPL176C TSR3Q12094 313 aaKnown RBP7.86□□□□□ -1.15
TRE1YPL176C PRY3P47033 881 aa7.78□□□□□ -1.16
TRE1YPL176C RIM101P33400 625 aa7.76□□□□□ -1.17
TRE1YPL176C YKR023WP36119 530 aaKnown RBP7.58□□□□□ -1.2
TRE1YPL176C DMA1P38823 416 aa7.58□□□□□ -1.2
TRE1YPL176C PTP3P40048 928 aa7.55□□□□□ -1.2
TRE1YPL176C OXP1P28273 1286 aa7.55□□□□□ -1.2
TRE1YPL176C YCK3P39962 524 aa7.53□□□□□ -1.2
TRE1YPL176C MRPL32P25348 183 aa7.48□□□□□ -1.21
TRE1YPL176C LEO1P38439 464 aa7.48□□□□□ -1.21
TRE1YPL176C SSP1P38871 571 aa7.44□□□□□ -1.22
TRE1YPL176C TFC8Q12308 588 aa7.4□□□□□ -1.22
TRE1YPL176C HOP09932 586 aa7.39□□□□□ -1.23
TRE1YPL176C YAH1Q12184 172 aaKnown RBP7.39□□□□□ -1.23
TRE1YPL176C CDC27P38042 758 aa7.38□□□□□ -1.23
TRE1YPL176C DCD1P06773 312 aa7.37□□□□□ -1.23
TRE1YPL176C YLR271WQ06152 274 aa7.36□□□□□ -1.23
TRE1YPL176C HAA1Q12753 694 aaKnown RBP7.33□□□□□ -1.24
TRE1YPL176C YIL055CP40523 627 aaKnown RBP7.32□□□□□ -1.24
TRE1YPL176C RSM7P47150 247 aa7.25□□□□□ -1.25
TRE1YPL176C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
TRE1YPL176C BCH2P36122 765 aa7.2□□□□□ -1.26
TRE1YPL176C MGA2P40578 1113 aa7.17□□□□□ -1.26
TRE1YPL176C CST9Q06032 482 aa7.16□□□□□ -1.26
TRE1YPL176C PSD2P53037 1138 aaKnown RBP7.15□□□□□ -1.26
TRE1YPL176C AI2P03876 854 aa7.14□□□□□ -1.27
TRE1YPL176C EPS1P40557 701 aa7.06□□□□□ -1.28
TRE1YPL176C BDF1P35817 686 aa7.03□□□□□ -1.28
TRE1YPL176C BBC1P47068 1157 aa7.03□□□□□ -1.28
TRE1YPL176C MAP2P38174 421 aaKnown RBP7.02□□□□□ -1.29
TRE1YPL176C SCY1P53009 804 aa7.01□□□□□ -1.29
TRE1YPL176C LEU3P08638 886 aa6.99□□□□□ -1.29
TRE1YPL176C UBP10P53874 792 aaPredicted RBP6.99□□□□□ -1.29
TRE1YPL176C YGL015CP33199 130 aa6.94□□□□□ -1.3
TRE1YPL176C MRM1P25270 412 aa6.93□□□□□ -1.3
TRE1YPL176C RCR1P38212 213 aa6.93□□□□□ -1.3
TRE1YPL176C DMA2P53924 522 aa6.9□□□□□ -1.3
TRE1YPL176C NAP1P25293 417 aaKnown RBP6.9□□□□□ -1.31
TRE1YPL176C RAM2P29703 316 aa6.9□□□□□ -1.31
TRE1YPL176C IFH1P39520 1085 aa6.89□□□□□ -1.31
TRE1YPL176C ABP1P15891 592 aaKnown RBP6.89□□□□□ -1.31
TRE1YPL176C SAS10Q12136 610 aaPredicted RBP6.88□□□□□ -1.31
TRE1YPL176C IOC4Q04213 475 aa6.88□□□□□ -1.31
TRE1YPL176C SLX5P32828 619 aaKnown RBP6.84□□□□□ -1.31
TRE1YPL176C RTG3P38165 486 aa6.82□□□□□ -1.32
TRE1YPL176C URN1Q06525 465 aaKnown RBP6.81□□□□□ -1.32
TRE1YPL176C AIM44Q99299 758 aa6.81□□□□□ -1.32
TRE1YPL176C VPS29P38759 282 aa6.79□□□□□ -1.32
TRE1YPL176C RLF2Q12495 606 aa6.75□□□□□ -1.33
TRE1YPL176C MAK11P20484 414 aaKnown RBP6.74□□□□□ -1.33
TRE1YPL176C SET1P38827 1080 aaKnown RBP6.74□□□□□ -1.33
TRE1YPL176C ORC1P54784 914 aaPredicted RBP6.73□□□□□ -1.33
TRE1YPL176C STS1P38637 319 aa6.71□□□□□ -1.34
TRE1YPL176C YPR148CQ06523 435 aa6.68□□□□□ -1.34
TRE1YPL176C RPN1P38764 993 aaKnown RBP6.68□□□□□ -1.34
TRE1YPL176C YMR1P47147 688 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
TRE1YPL176C COQ8P27697 501 aa6.66□□□□□ -1.34
TRE1YPL176C TIF4632P39936 914 aaKnown RBP6.65□□□□□ -1.35
TRE1YPL176C DBP1P24784 617 aaKnown RBP6.64□□□□□ -1.35
TRE1YPL176C NSR1P27476 414 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
TRE1YPL176C YFR006WP43590 535 aa6.64□□□□□ -1.35
TRE1YPL176C TGL3P40308 642 aa6.64□□□□□ -1.35
TRE1YPL176C EDS1P38073 919 aa6.62□□□□□ -1.35
TRE1YPL176C YOR238WQ08634 303 aa6.62□□□□□ -1.35
TRE1YPL176C VPS70P47161 811 aa6.61□□□□□ -1.35
TRE1YPL176C MIF2P35201 549 aa6.58□□□□□ -1.36
TRE1YPL176C PIB1Q06651 286 aa6.58□□□□□ -1.36
TRE1YPL176C YAP5P40574 245 aa6.57□□□□□ -1.36
TRE1YPL176C CKB1P43639 278 aa6.55□□□□□ -1.36
TRE1YPL176C NOP53Q12080 455 aaKnown RBP6.54□□□□□ -1.36
TRE1YPL176C VMA1P17255 1071 aaKnown RBP6.52□□□□□ -1.37
TRE1YPL176C PTC3P34221 468 aaKnown RBP6.52□□□□□ -1.37
TRE1YPL176C MON2P48563 1636 aaPredicted RBP6.52□□□□□ -1.37
TRE1YPL176C MST1P07236 462 aa6.51□□□□□ -1.37
TRE1YPL176C SPB4P25808 606 aaPredicted RBP6.5□□□□□ -1.37
TRE1YPL176C DSF2P38213 736 aa6.49□□□□□ -1.37
TRE1YPL176C YML020WQ03722 664 aa6.49□□□□□ -1.37
TRE1YPL176C PBS2P08018 668 aa6.47□□□□□ -1.37
TRE1YPL176C NOP8Q08287 484 aaPredicted RBP6.46□□□□□ -1.38
TRE1YPL176C YRB30P53107 440 aaPredicted RBP6.45□□□□□ -1.38
TRE1YPL176C SAM3Q08986 587 aa6.44□□□□□ -1.38
TRE1YPL176C TOP1P04786 769 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms