RNA–Protein interactions for RNA: YMR060C

SAM37, Transcript of Component of the Sorting and Assembly Machinery (SAM) complex, yeastyeast

Gene SAM37, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM37YMR060C MTC1P47018 478 aaKnown RBP13.96□□□□□ -0.17
SAM37YMR060C DRS1P32892 752 aaKnown RBP12.89□□□□□ -0.35
SAM37YMR060C FAP1P53971 965 aa12.77□□□□□ -0.37
SAM37YMR060C PRY3P47033 881 aa11.99□□□□□ -0.49
SAM37YMR060C PRI1P10363 409 aa11.87□□□□□ -0.51
SAM37YMR060C AAD16Q02895 342 aa11.84□□□□□ -0.51
SAM37YMR060C ISW2Q08773 1120 aa11.65□□□□□ -0.54
SAM37YMR060C RPG1P38249 964 aaKnown RBP11.5□□□□□ -0.57
SAM37YMR060C DIP2Q12220 943 aaPredicted RBP11.37□□□□□ -0.59
SAM37YMR060C HAA1Q12753 694 aaKnown RBP11.28□□□□□ -0.6
SAM37YMR060C YCK3P39962 524 aa11.24□□□□□ -0.61
SAM37YMR060C TSR3Q12094 313 aaKnown RBP11.19□□□□□ -0.62
SAM37YMR060C RSE1Q04693 1361 aaKnown RBP11.04□□□□□ -0.64
SAM37YMR060C AVT3P36062 692 aa10.89□□□□□ -0.67
SAM37YMR060C BFR2Q06631 534 aaKnown RBP10.87□□□□□ -0.67
SAM37YMR060C MRPL32P25348 183 aa10.8□□□□□ -0.68
SAM37YMR060C REB1P21538 810 aa10.68□□□□□ -0.7
SAM37YMR060C RPL17AP05740 184 aaKnown RBP10.67□□□□□ -0.7
SAM37YMR060C RPL17BP46990 184 aaKnown RBP10.67□□□□□ -0.7
SAM37YMR060C YGL015CP33199 130 aa10.42□□□□□ -0.74
SAM37YMR060C SPT21P35209 758 aa10.19□□□□□ -0.78
SAM37YMR060C TFA1P36100 482 aa10.19□□□□□ -0.78
SAM37YMR060C CDC27P38042 758 aa10.17□□□□□ -0.78
SAM37YMR060C YKR023WP36119 530 aaKnown RBP10.12□□□□□ -0.79
SAM37YMR060C UBP10P53874 792 aaPredicted RBP9.96□□□□□ -0.82
SAM37YMR060C TFC8Q12308 588 aa9.92□□□□□ -0.82
SAM37YMR060C HOP09932 586 aa9.91□□□□□ -0.82
SAM37YMR060C MAP2P38174 421 aaKnown RBP9.89□□□□□ -0.83
SAM37YMR060C DCD1P06773 312 aa9.85□□□□□ -0.83
SAM37YMR060C RIM101P33400 625 aa9.82□□□□□ -0.84
SAM37YMR060C SCY1P53009 804 aa9.68□□□□□ -0.86
SAM37YMR060C BCH2P36122 765 aa9.59□□□□□ -0.87
SAM37YMR060C TIF4632P39936 914 aaKnown RBP9.59□□□□□ -0.87
SAM37YMR060C BUD31P25337 157 aaPredicted RBP9.58□□□□□ -0.88
SAM37YMR060C SLX5P32828 619 aaKnown RBP9.58□□□□□ -0.88
SAM37YMR060C TGL3P40308 642 aa9.53□□□□□ -0.88
SAM37YMR060C OXP1P28273 1286 aa9.46□□□□□ -0.9
SAM37YMR060C YIL055CP40523 627 aaKnown RBP9.39□□□□□ -0.91
SAM37YMR060C PTP3P40048 928 aa9.37□□□□□ -0.91
SAM37YMR060C EPS1P40557 701 aa9.34□□□□□ -0.91
SAM37YMR060C UBP9P39967 754 aa9.32□□□□□ -0.92
SAM37YMR060C BDF1P35817 686 aa9.31□□□□□ -0.92
SAM37YMR060C RSM7P47150 247 aa9.22□□□□□ -0.93
SAM37YMR060C BBC1P47068 1157 aa9.2□□□□□ -0.94
SAM37YMR060C YAH1Q12184 172 aaKnown RBP9.17□□□□□ -0.94
SAM37YMR060C AI2P03876 854 aa9.15□□□□□ -0.94
SAM37YMR060C SIS1P25294 352 aaKnown RBP9.13□□□□□ -0.95
SAM37YMR060C MST1P07236 462 aa9.09□□□□□ -0.95
SAM37YMR060C YOR238WQ08634 303 aa9.08□□□□□ -0.96
SAM37YMR060C NSR1P27476 414 aaKnown RBP RIP-Chip data9.06□□□□□ -0.96not detected
SAM37YMR060C YLR271WQ06152 274 aa9.02□□□□□ -0.97
SAM37YMR060C YAP5P40574 245 aa9□□□□□ -0.97
SAM37YMR060C YBL029C-AQ3E756 94 aa8.95□□□□□ -0.98
SAM37YMR060C PSD2P53037 1138 aaKnown RBP8.91□□□□□ -0.98
SAM37YMR060C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
SAM37YMR060C SSP1P38871 571 aa8.87□□□□□ -0.99
SAM37YMR060C VNX1P42839 908 aa8.87□□□□□ -0.99
SAM37YMR060C SPP1Q03012 353 aa8.82□□□□□ -1
SAM37YMR060C WSC3Q12215 556 aa8.81□□□□□ -1
SAM37YMR060C MRM1P25270 412 aa8.8□□□□□ -1
SAM37YMR060C GTT3P39996 337 aa8.8□□□□□ -1
SAM37YMR060C TIF11P38912 153 aaKnown RBP8.71□□□□□ -1.02
SAM37YMR060C MGA2P40578 1113 aa8.71□□□□□ -1.02
SAM37YMR060C PIB1Q06651 286 aa8.7□□□□□ -1.02
SAM37YMR060C CST9Q06032 482 aa8.67□□□□□ -1.02
SAM37YMR060C RTG3P38165 486 aa8.64□□□□□ -1.03
SAM37YMR060C YMR1P47147 688 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
SAM37YMR060C VPS29P38759 282 aa8.6□□□□□ -1.03
SAM37YMR060C ULI1P43604 169 aa8.6□□□□□ -1.03
SAM37YMR060C MSB4Q12317 492 aa8.59□□□□□ -1.03
SAM37YMR060C AIR2Q12476 344 aaKnown RBP8.59□□□□□ -1.03
SAM37YMR060C DBP1P24784 617 aaKnown RBP8.58□□□□□ -1.04
SAM37YMR060C FKH1P40466 484 aa8.58□□□□□ -1.04
SAM37YMR060C RQC2Q12532 1038 aaKnown RBP8.58□□□□□ -1.04
SAM37YMR060C YJL171CP46992 396 aa8.57□□□□□ -1.04
SAM37YMR060C LDB19Q12502 818 aa8.57□□□□□ -1.04
SAM37YMR060C EAP1P36041 632 aaKnown RBP8.56□□□□□ -1.04
SAM37YMR060C IOC2Q12072 812 aa8.56□□□□□ -1.04
SAM37YMR060C YFR006WP43590 535 aa8.53□□□□□ -1.04
SAM37YMR060C STS1P38637 319 aa8.51□□□□□ -1.05
SAM37YMR060C YOL036WQ08206 761 aa8.51□□□□□ -1.05
SAM37YMR060C VMA1P17255 1071 aaKnown RBP8.5□□□□□ -1.05
SAM37YMR060C SET4P42948 560 aa8.5□□□□□ -1.05
SAM37YMR060C RCR1P38212 213 aa8.48□□□□□ -1.05
SAM37YMR060C TRP5P00931 707 aaKnown RBP8.45□□□□□ -1.06
SAM37YMR060C SAM3Q08986 587 aa8.45□□□□□ -1.06
SAM37YMR060C BMT6Q12291 365 aa8.44□□□□□ -1.06
SAM37YMR060C RTG1P32607 177 aa8.42□□□□□ -1.06
SAM37YMR060C DMA1P38823 416 aa8.42□□□□□ -1.06
SAM37YMR060C YNL035CP53962 389 aaKnown RBP8.39□□□□□ -1.07
SAM37YMR060C NCR1Q12200 1170 aa8.38□□□□□ -1.07
SAM37YMR060C ABP1P15891 592 aaKnown RBP8.36□□□□□ -1.07
SAM37YMR060C SEC61P32915 480 aa8.36□□□□□ -1.07
SAM37YMR060C GYP5Q12344 894 aa8.34□□□□□ -1.07
SAM37YMR060C TFG1P41895 735 aaPredicted RBP8.31□□□□□ -1.08
SAM37YMR060C JIP4Q03361 876 aa8.3□□□□□ -1.08
SAM37YMR060C HTA1P04911 132 aaKnown RBP8.28□□□□□ -1.08
SAM37YMR060C HTA2P04912 132 aa8.28□□□□□ -1.08
SAM37YMR060C DAN4P47179 1161 aa8.27□□□□□ -1.09
SAM37YMR060C DCW1P36091 449 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms