RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W DRS1P32892 752 aaKnown RBP10.75□□□□□ -0.69
TFB3YDR460W MTC1P47018 478 aaKnown RBP10.69□□□□□ -0.7
TFB3YDR460W FAP1P53971 965 aa10.06□□□□□ -0.8
TFB3YDR460W PRY3P47033 881 aa9.49□□□□□ -0.89
TFB3YDR460W BFR2Q06631 534 aaKnown RBP9.32□□□□□ -0.92
TFB3YDR460W PRI1P10363 409 aa9.23□□□□□ -0.93
TFB3YDR460W AAD16Q02895 342 aa9.21□□□□□ -0.94
TFB3YDR460W DIP2Q12220 943 aaPredicted RBP9.15□□□□□ -0.94
TFB3YDR460W AVT3P36062 692 aa9.03□□□□□ -0.96
TFB3YDR460W YCK3P39962 524 aa8.97□□□□□ -0.97
TFB3YDR460W ISW2Q08773 1120 aa8.92□□□□□ -0.98
TFB3YDR460W RPG1P38249 964 aaKnown RBP8.86□□□□□ -0.99
TFB3YDR460W HAA1Q12753 694 aaKnown RBP8.85□□□□□ -0.99
TFB3YDR460W TFA1P36100 482 aa8.8□□□□□ -1
TFB3YDR460W TSR3Q12094 313 aaKnown RBP8.72□□□□□ -1.01
TFB3YDR460W RSE1Q04693 1361 aaKnown RBP8.63□□□□□ -1.03
TFB3YDR460W MRPL32P25348 183 aa8.35□□□□□ -1.07
TFB3YDR460W RPL17AP05740 184 aaKnown RBP8.3□□□□□ -1.08
TFB3YDR460W RPL17BP46990 184 aaKnown RBP8.3□□□□□ -1.08
TFB3YDR460W MON2P48563 1636 aaPredicted RBP8.19□□□□□ -1.1
TFB3YDR460W REB1P21538 810 aa8.19□□□□□ -1.1
TFB3YDR460W INO80P53115 1489 aa8.18□□□□□ -1.1
TFB3YDR460W YGL015CP33199 130 aa8.1□□□□□ -1.11
TFB3YDR460W SPT21P35209 758 aa7.99□□□□□ -1.13
TFB3YDR460W RIM101P33400 625 aa7.9□□□□□ -1.14
TFB3YDR460W CDC27P38042 758 aa7.89□□□□□ -1.15
TFB3YDR460W DNA2P38859 1522 aa7.8□□□□□ -1.16
TFB3YDR460W YKR023WP36119 530 aaKnown RBP7.77□□□□□ -1.17
TFB3YDR460W UBP10P53874 792 aaPredicted RBP7.7□□□□□ -1.18
TFB3YDR460W MAP2P38174 421 aaKnown RBP7.69□□□□□ -1.18
TFB3YDR460W OXP1P28273 1286 aa7.66□□□□□ -1.18
TFB3YDR460W SWR1Q05471 1514 aa7.65□□□□□ -1.18
TFB3YDR460W PTP3P40048 928 aa7.64□□□□□ -1.19
TFB3YDR460W BUD31P25337 157 aaPredicted RBP7.63□□□□□ -1.19
TFB3YDR460W HOP09932 586 aa7.62□□□□□ -1.19
TFB3YDR460W KOG1P38873 1557 aa7.61□□□□□ -1.19
TFB3YDR460W DCD1P06773 312 aa7.6□□□□□ -1.19
TFB3YDR460W TFC8Q12308 588 aa7.6□□□□□ -1.19
TFB3YDR460W SSP1P38871 571 aa7.56□□□□□ -1.2
TFB3YDR460W YIL055CP40523 627 aaKnown RBP7.55□□□□□ -1.2
TFB3YDR460W YAH1Q12184 172 aaKnown RBP7.54□□□□□ -1.2
TFB3YDR460W RQC2Q12532 1038 aaKnown RBP7.49□□□□□ -1.21
TFB3YDR460W SCY1P53009 804 aa7.45□□□□□ -1.22
TFB3YDR460W YLR271WQ06152 274 aa7.45□□□□□ -1.22
TFB3YDR460W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
TFB3YDR460W TY1B-DR4Q07793 1604 aa7.44□□□□□ -1.22
TFB3YDR460W RSM7P47150 247 aa7.43□□□□□ -1.22
TFB3YDR460W TCB3Q03640 1545 aaKnown RBP7.39□□□□□ -1.23
TFB3YDR460W SLX5P32828 619 aaKnown RBP7.38□□□□□ -1.23
TFB3YDR460W TIF4632P39936 914 aaKnown RBP7.37□□□□□ -1.23
TFB3YDR460W BCH2P36122 765 aa7.35□□□□□ -1.23
TFB3YDR460W TGL3P40308 642 aa7.34□□□□□ -1.23
TFB3YDR460W AI2P03876 854 aa7.3□□□□□ -1.24
TFB3YDR460W MGA2P40578 1113 aa7.29□□□□□ -1.24
TFB3YDR460W SPA2P23201 1466 aaKnown RBP7.28□□□□□ -1.24
TFB3YDR460W DMA1P38823 416 aa7.26□□□□□ -1.25
TFB3YDR460W BBC1P47068 1157 aa7.25□□□□□ -1.25
TFB3YDR460W PSD2P53037 1138 aaKnown RBP7.25□□□□□ -1.25
TFB3YDR460W EPS1P40557 701 aa7.24□□□□□ -1.25
TFB3YDR460W UBP9P39967 754 aa7.23□□□□□ -1.25
TFB3YDR460W SIS1P25294 352 aaKnown RBP7.22□□□□□ -1.25
TFB3YDR460W CST9Q06032 482 aa7.22□□□□□ -1.25
TFB3YDR460W BDF1P35817 686 aa7.18□□□□□ -1.26
TFB3YDR460W ECM5Q03214 1411 aa7.1□□□□□ -1.27
TFB3YDR460W HSL1P34244 1518 aa7.09□□□□□ -1.27
TFB3YDR460W SPT6P23615 1451 aaKnown RBP7.08□□□□□ -1.28
TFB3YDR460W MRM1P25270 412 aa7.07□□□□□ -1.28
TFB3YDR460W SGS1P35187 1447 aa7.05□□□□□ -1.28
TFB3YDR460W MST1P07236 462 aa7□□□□□ -1.29
TFB3YDR460W RTG3P38165 486 aa6.99□□□□□ -1.29
TFB3YDR460W RCR1P38212 213 aa6.97□□□□□ -1.29
TFB3YDR460W BUD4P47136 1447 aa6.97□□□□□ -1.29
TFB3YDR460W YBL029C-AQ3E756 94 aa6.97□□□□□ -1.29
TFB3YDR460W THO2P53552 1597 aaKnown RBP6.96□□□□□ -1.29
TFB3YDR460W RAM2P29703 316 aa6.96□□□□□ -1.3
TFB3YDR460W YOR238WQ08634 303 aa6.95□□□□□ -1.3
TFB3YDR460W MDS3P53094 1487 aa6.95□□□□□ -1.3
TFB3YDR460W REV3P14284 1504 aa6.92□□□□□ -1.3
TFB3YDR460W NSR1P27476 414 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3 RIP-Chip
TFB3YDR460W HIR3P47171 1648 aa6.91□□□□□ -1.3
TFB3YDR460W VPS29P38759 282 aa6.91□□□□□ -1.3
TFB3YDR460W SAS10Q12136 610 aaPredicted RBP6.87□□□□□ -1.31
TFB3YDR460W MAK11P20484 414 aaKnown RBP6.86□□□□□ -1.31
TFB3YDR460W VNX1P42839 908 aa6.86□□□□□ -1.31
TFB3YDR460W PEP1P32319 1579 aa6.86□□□□□ -1.31
TFB3YDR460W YAP5P40574 245 aa6.85□□□□□ -1.31
TFB3YDR460W YMR1P47147 688 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
TFB3YDR460W SET1P38827 1080 aaKnown RBP6.83□□□□□ -1.32
TFB3YDR460W MIF2P35201 549 aa6.81□□□□□ -1.32
TFB3YDR460W DBP1P24784 617 aaKnown RBP6.8□□□□□ -1.32
TFB3YDR460W STS1P38637 319 aa6.8□□□□□ -1.32
TFB3YDR460W WSC3Q12215 556 aa6.8□□□□□ -1.32
TFB3YDR460W BPT1P14772 1559 aa6.79□□□□□ -1.32
TFB3YDR460W SPP1Q03012 353 aa6.79□□□□□ -1.32
TFB3YDR460W YFR006WP43590 535 aa6.78□□□□□ -1.32
TFB3YDR460W COQ8P27697 501 aa6.76□□□□□ -1.33
TFB3YDR460W IFH1P39520 1085 aa6.74□□□□□ -1.33
TFB3YDR460W PIB1Q06651 286 aa6.74□□□□□ -1.33
TFB3YDR460W ATG2P53855 1592 aa6.74□□□□□ -1.33
TFB3YDR460W YPR148CQ06523 435 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms