RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C DRS1P32892 752 aaKnown RBP12.46□□□□□ -0.42
RPN4YDL020C MTC1P47018 478 aaKnown RBP12.4□□□□□ -0.42
RPN4YDL020C FAP1P53971 965 aa12.4□□□□□ -0.42
RPN4YDL020C PRY3P47033 881 aa11.71□□□□□ -0.53
RPN4YDL020C AAD16Q02895 342 aa11.16□□□□□ -0.62
RPN4YDL020C YCK3P39962 524 aa11.11□□□□□ -0.63
RPN4YDL020C PRI1P10363 409 aa11.1□□□□□ -0.63
RPN4YDL020C HAA1Q12753 694 aaKnown RBP10.93□□□□□ -0.66
RPN4YDL020C BFR2Q06631 534 aaKnown RBP10.86□□□□□ -0.67
RPN4YDL020C DIP2Q12220 943 aaPredicted RBP10.53□□□□□ -0.72
RPN4YDL020C ISW2Q08773 1120 aa10.49□□□□□ -0.73
RPN4YDL020C AVT3P36062 692 aa10.44□□□□□ -0.74
RPN4YDL020C RPG1P38249 964 aaKnown RBP10.44□□□□□ -0.74
RPN4YDL020C TSR3Q12094 313 aaKnown RBP10.42□□□□□ -0.74
RPN4YDL020C TFA1P36100 482 aa10.34□□□□□ -0.75
RPN4YDL020C MRPL32P25348 183 aa9.99□□□□□ -0.81
RPN4YDL020C YGL015CP33199 130 aa9.89□□□□□ -0.83
RPN4YDL020C RSE1Q04693 1361 aaKnown RBP9.89□□□□□ -0.83
RPN4YDL020C BUD31P25337 157 aaPredicted RBP9.6□□□□□ -0.87
RPN4YDL020C RPL17AP05740 184 aaKnown RBP9.51□□□□□ -0.89
RPN4YDL020C RPL17BP46990 184 aaKnown RBP9.51□□□□□ -0.89
RPN4YDL020C REB1P21538 810 aa9.37□□□□□ -0.91
RPN4YDL020C CDC27P38042 758 aa9.34□□□□□ -0.91
RPN4YDL020C UBP10P53874 792 aaPredicted RBP9.2□□□□□ -0.94
RPN4YDL020C SPT21P35209 758 aa9.16□□□□□ -0.94
RPN4YDL020C MAP2P38174 421 aaKnown RBP9.16□□□□□ -0.94
RPN4YDL020C RIM101P33400 625 aa9.08□□□□□ -0.96
RPN4YDL020C YKR023WP36119 530 aaKnown RBP9.03□□□□□ -0.96
RPN4YDL020C SIS1P25294 352 aaKnown RBP9□□□□□ -0.97
RPN4YDL020C RQC2Q12532 1038 aaKnown RBP8.96□□□□□ -0.97
RPN4YDL020C PTP3P40048 928 aa8.9□□□□□ -0.98
RPN4YDL020C UBP9P39967 754 aa8.85□□□□□ -0.99
RPN4YDL020C DCD1P06773 312 aa8.84□□□□□ -0.99
RPN4YDL020C TFC8Q12308 588 aa8.84□□□□□ -0.99
RPN4YDL020C HOP09932 586 aa8.83□□□□□ -1
RPN4YDL020C OXP1P28273 1286 aa8.82□□□□□ -1
RPN4YDL020C TIF4632P39936 914 aaKnown RBP8.8□□□□□ -1
RPN4YDL020C TGL3P40308 642 aa8.8□□□□□ -1
RPN4YDL020C SSP1P38871 571 aa8.78□□□□□ -1
RPN4YDL020C SCY1P53009 804 aa8.77□□□□□ -1.01
RPN4YDL020C SLX5P32828 619 aaKnown RBP8.72□□□□□ -1.01
RPN4YDL020C YAH1Q12184 172 aaKnown RBP8.72□□□□□ -1.01
RPN4YDL020C YIL055CP40523 627 aaKnown RBP8.69□□□□□ -1.02
RPN4YDL020C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
RPN4YDL020C YLR271WQ06152 274 aa8.61□□□□□ -1.03
RPN4YDL020C DMA1P38823 416 aa8.6□□□□□ -1.03
RPN4YDL020C RSM7P47150 247 aa8.56□□□□□ -1.04
RPN4YDL020C BCH2P36122 765 aa8.51□□□□□ -1.05
RPN4YDL020C MGA2P40578 1113 aa8.44□□□□□ -1.06
RPN4YDL020C AI2P03876 854 aa8.39□□□□□ -1.07
RPN4YDL020C PSD2P53037 1138 aaKnown RBP8.35□□□□□ -1.07
RPN4YDL020C CST9Q06032 482 aa8.35□□□□□ -1.07
RPN4YDL020C YBL029C-AQ3E756 94 aa8.35□□□□□ -1.07
RPN4YDL020C MST1P07236 462 aa8.33□□□□□ -1.08
RPN4YDL020C BBC1P47068 1157 aa8.33□□□□□ -1.08
RPN4YDL020C EPS1P40557 701 aa8.28□□□□□ -1.08
RPN4YDL020C BDF1P35817 686 aa8.22□□□□□ -1.09
RPN4YDL020C VNX1P42839 908 aa8.22□□□□□ -1.09
RPN4YDL020C YOR238WQ08634 303 aa8.21□□□□□ -1.1
RPN4YDL020C MRM1P25270 412 aa8.14□□□□□ -1.11
RPN4YDL020C SPP1Q03012 353 aa8.11□□□□□ -1.11
RPN4YDL020C AIR2Q12476 344 aaKnown RBP8.1□□□□□ -1.11
RPN4YDL020C NSR1P27476 414 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
RPN4YDL020C RAM2P29703 316 aa8.07□□□□□ -1.12
RPN4YDL020C SAS10Q12136 610 aaPredicted RBP8.07□□□□□ -1.12
RPN4YDL020C RCR1P38212 213 aa8.05□□□□□ -1.12
RPN4YDL020C RTG3P38165 486 aa8.05□□□□□ -1.12
RPN4YDL020C FKH1P40466 484 aa8.05□□□□□ -1.12
RPN4YDL020C WSC3Q12215 556 aa8.04□□□□□ -1.12
RPN4YDL020C YJL171CP46992 396 aa8.03□□□□□ -1.12
RPN4YDL020C YAP5P40574 245 aa7.99□□□□□ -1.13
RPN4YDL020C TIF11P38912 153 aaKnown RBP7.97□□□□□ -1.13
RPN4YDL020C VPS29P38759 282 aa7.94□□□□□ -1.14
RPN4YDL020C SET1P38827 1080 aaKnown RBP7.94□□□□□ -1.14
RPN4YDL020C MAK11P20484 414 aaKnown RBP7.93□□□□□ -1.14
RPN4YDL020C LEO1P38439 464 aa7.88□□□□□ -1.15
RPN4YDL020C YMR1P47147 688 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
RPN4YDL020C LEU3P08638 886 aa7.86□□□□□ -1.15
RPN4YDL020C LDB19Q12502 818 aa7.86□□□□□ -1.15
RPN4YDL020C BMT6Q12291 365 aa7.85□□□□□ -1.15
RPN4YDL020C IFH1P39520 1085 aa7.84□□□□□ -1.15
RPN4YDL020C YPR148CQ06523 435 aa7.84□□□□□ -1.15
RPN4YDL020C STS1P38637 319 aa7.83□□□□□ -1.16
RPN4YDL020C GTT3P39996 337 aa7.83□□□□□ -1.16
RPN4YDL020C COQ8P27697 501 aa7.82□□□□□ -1.16
RPN4YDL020C VPS70P47161 811 aa7.82□□□□□ -1.16
RPN4YDL020C IOC2Q12072 812 aa7.82□□□□□ -1.16
RPN4YDL020C DBP1P24784 617 aaKnown RBP7.81□□□□□ -1.16
RPN4YDL020C YFR006WP43590 535 aa7.8□□□□□ -1.16
RPN4YDL020C ULI1P43604 169 aa7.8□□□□□ -1.16
RPN4YDL020C CKB1P43639 278 aa7.79□□□□□ -1.16
RPN4YDL020C MIF2P35201 549 aa7.78□□□□□ -1.16
RPN4YDL020C NOP53Q12080 455 aaKnown RBP7.75□□□□□ -1.17
RPN4YDL020C SPB4P25808 606 aaPredicted RBP7.74□□□□□ -1.17
RPN4YDL020C EDS1P38073 919 aa7.74□□□□□ -1.17
RPN4YDL020C PIB1Q06651 286 aa7.72□□□□□ -1.17
RPN4YDL020C PTC3P34221 468 aaKnown RBP7.67□□□□□ -1.18
RPN4YDL020C VMA1P17255 1071 aaKnown RBP7.65□□□□□ -1.18
RPN4YDL020C TAF7Q05021 590 aa7.65□□□□□ -1.18
RPN4YDL020C PBS2P08018 668 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms