RNA–Protein interactions for RNA: YOL113W

SKM1, Transcript of Member of the PAK family of serine/threonine protein kinases, yeastyeast

Gene SKM1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKM1YOL113W DRS1P32892 752 aaKnown RBP9.15□□□□□ -0.95
SKM1YOL113W MTC1P47018 478 aaKnown RBP8.89□□□□□ -0.99
SKM1YOL113W TFA1P36100 482 aa8.65□□□□□ -1.02
SKM1YOL113W BFR2Q06631 534 aaKnown RBP8.39□□□□□ -1.07
SKM1YOL113W RQC2Q12532 1038 aaKnown RBP8.35□□□□□ -1.07
SKM1YOL113W TAF7Q05021 590 aa8.25□□□□□ -1.09
SKM1YOL113W DIP2Q12220 943 aaPredicted RBP7.63□□□□□ -1.19
SKM1YOL113W AVT3P36062 692 aa7.62□□□□□ -1.19
SKM1YOL113W DMA1P38823 416 aa7.62□□□□□ -1.19
SKM1YOL113W LEO1P38439 464 aa7.46□□□□□ -1.21
SKM1YOL113W FAP1P53971 965 aa7.26□□□□□ -1.25
SKM1YOL113W ISW2Q08773 1120 aa7.19□□□□□ -1.26
SKM1YOL113W RSE1Q04693 1361 aaKnown RBP7.16□□□□□ -1.26
SKM1YOL113W PRI1P10363 409 aa7.1□□□□□ -1.27
SKM1YOL113W RPG1P38249 964 aaKnown RBP7.1□□□□□ -1.27
SKM1YOL113W LEU3P08638 886 aa6.95□□□□□ -1.3
SKM1YOL113W DMA2P53924 522 aa6.94□□□□□ -1.3
SKM1YOL113W AAD16Q02895 342 aa6.94□□□□□ -1.3
SKM1YOL113W PRY3P47033 881 aa6.92□□□□□ -1.3
SKM1YOL113W PTP3P40048 928 aa6.91□□□□□ -1.3
SKM1YOL113W ABP1P15891 592 aaKnown RBP6.89□□□□□ -1.31
SKM1YOL113W RPL17AP05740 184 aaKnown RBP6.88□□□□□ -1.31
SKM1YOL113W RPL17BP46990 184 aaKnown RBP6.88□□□□□ -1.31
SKM1YOL113W IOC4Q04213 475 aa6.88□□□□□ -1.31
SKM1YOL113W IFH1P39520 1085 aa6.87□□□□□ -1.31
SKM1YOL113W NAP1P25293 417 aaKnown RBP6.86□□□□□ -1.31
SKM1YOL113W URN1Q06525 465 aaKnown RBP6.81□□□□□ -1.32
SKM1YOL113W REB1P21538 810 aa6.78□□□□□ -1.32
SKM1YOL113W SAS10Q12136 610 aaPredicted RBP6.78□□□□□ -1.32
SKM1YOL113W AIM44Q99299 758 aa6.78□□□□□ -1.32
SKM1YOL113W RLF2Q12495 606 aa6.74□□□□□ -1.33
SKM1YOL113W TSR3Q12094 313 aaKnown RBP6.73□□□□□ -1.33
SKM1YOL113W ORC1P54784 914 aaPredicted RBP6.69□□□□□ -1.34
SKM1YOL113W SPT21P35209 758 aa6.68□□□□□ -1.34
SKM1YOL113W RPN1P38764 993 aaKnown RBP6.66□□□□□ -1.34
SKM1YOL113W RIM101P33400 625 aa6.61□□□□□ -1.35
SKM1YOL113W SSP1P38871 571 aa6.57□□□□□ -1.36
SKM1YOL113W YML020WQ03722 664 aa6.49□□□□□ -1.37
SKM1YOL113W CKB1P43639 278 aa6.49□□□□□ -1.37
SKM1YOL113W YKR023WP36119 530 aaKnown RBP6.45□□□□□ -1.38
SKM1YOL113W MRPL32P25348 183 aa6.44□□□□□ -1.38
SKM1YOL113W YCK3P39962 524 aa6.42□□□□□ -1.38
SKM1YOL113W YRB30P53107 440 aaPredicted RBP6.42□□□□□ -1.38
SKM1YOL113W NOP8Q08287 484 aaPredicted RBP6.42□□□□□ -1.38
SKM1YOL113W OXP1P28273 1286 aa6.41□□□□□ -1.38
SKM1YOL113W TOP1P04786 769 aa6.38□□□□□ -1.39
SKM1YOL113W SPB4P25808 606 aaPredicted RBP6.37□□□□□ -1.39
SKM1YOL113W SNU71P53207 620 aaKnown RBP6.37□□□□□ -1.39
SKM1YOL113W HAA1Q12753 694 aaKnown RBP6.35□□□□□ -1.39
SKM1YOL113W SLX8P40072 274 aa6.34□□□□□ -1.39
SKM1YOL113W YAH1Q12184 172 aaKnown RBP6.31□□□□□ -1.4
SKM1YOL113W TFC8Q12308 588 aa6.31□□□□□ -1.4
SKM1YOL113W BRL1P38770 471 aa6.3□□□□□ -1.4
SKM1YOL113W HOP09932 586 aa6.29□□□□□ -1.4
SKM1YOL113W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SKM1YOL113W CDC27P38042 758 aa6.29□□□□□ -1.4
SKM1YOL113W KIN1P13185 1064 aa6.28□□□□□ -1.4
SKM1YOL113W NOP7P53261 605 aaKnown RBP6.28□□□□□ -1.4
SKM1YOL113W YIL055CP40523 627 aaKnown RBP6.27□□□□□ -1.41
SKM1YOL113W YLR271WQ06152 274 aa6.26□□□□□ -1.41
SKM1YOL113W DCD1P06773 312 aa6.26□□□□□ -1.41
SKM1YOL113W GEF1P37020 779 aa6.24□□□□□ -1.41
SKM1YOL113W SSA1P10591 642 aaKnown RBP6.22□□□□□ -1.41
SKM1YOL113W ATG36P46983 293 aa6.22□□□□□ -1.41
SKM1YOL113W MRX12P47084 519 aa6.22□□□□□ -1.41
SKM1YOL113W VPS70P47161 811 aa6.22□□□□□ -1.41
SKM1YOL113W MAM3Q12296 706 aa6.21□□□□□ -1.42
SKM1YOL113W MGA2P40578 1113 aa6.2□□□□□ -1.42
SKM1YOL113W RSM7P47150 247 aa6.19□□□□□ -1.42
SKM1YOL113W HGH1P48362 394 aaKnown RBP6.19□□□□□ -1.42
SKM1YOL113W SUB2Q07478 446 aaKnown RBP6.19□□□□□ -1.42
SKM1YOL113W SWE1P32944 819 aa6.18□□□□□ -1.42
SKM1YOL113W NUG1P40010 520 aaKnown RBP6.18□□□□□ -1.42
SKM1YOL113W LAM6Q08001 693 aa6.18□□□□□ -1.42
SKM1YOL113W MET10P39692 1035 aa6.17□□□□□ -1.42
SKM1YOL113W BRN1P38170 754 aa6.17□□□□□ -1.42
SKM1YOL113W GUA1P38625 525 aaKnown RBP6.17□□□□□ -1.42
SKM1YOL113W PAM1P37304 830 aaKnown RBP6.16□□□□□ -1.42
SKM1YOL113W CST9Q06032 482 aa6.16□□□□□ -1.42
SKM1YOL113W BUD31P25337 157 aaPredicted RBP6.15□□□□□ -1.43
SKM1YOL113W GLC3P32775 704 aa6.15□□□□□ -1.43
SKM1YOL113W YNR021WP53723 404 aaKnown RBP6.15□□□□□ -1.43
SKM1YOL113W YPR148CQ06523 435 aa6.15□□□□□ -1.43
SKM1YOL113W BCH2P36122 765 aa6.14□□□□□ -1.43
SKM1YOL113W SET1P38827 1080 aaKnown RBP6.14□□□□□ -1.43
SKM1YOL113W DSF2P38213 736 aa6.13□□□□□ -1.43
SKM1YOL113W FAR11P53917 953 aa6.13□□□□□ -1.43
SKM1YOL113W SPC42P36094 363 aa6.13□□□□□ -1.43
SKM1YOL113W RTS3P53289 263 aa6.11□□□□□ -1.43
SKM1YOL113W YTA7P40340 1379 aa6.11□□□□□ -1.43
SKM1YOL113W YJR008WP47085 338 aa6.1□□□□□ -1.43
SKM1YOL113W RRN6P32786 894 aa6.09□□□□□ -1.43
SKM1YOL113W MDG1P53885 366 aa6.09□□□□□ -1.43
SKM1YOL113W AI2P03876 854 aa6.08□□□□□ -1.44
SKM1YOL113W PSD2P53037 1138 aaKnown RBP6.07□□□□□ -1.44
SKM1YOL113W PBS2P08018 668 aa6.07□□□□□ -1.44
SKM1YOL113W SLD2P34252 453 aa6.07□□□□□ -1.44
SKM1YOL113W SUB1P54000 292 aaKnown RBP6.07□□□□□ -1.44
SKM1YOL113W AIM7Q12156 149 aa6.07□□□□□ -1.44
SKM1YOL113W RAM2P29703 316 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms