Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL2P13500 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCL2P13500 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCL2P13500 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
CCL2P13500 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL2P13500 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL2P13500 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.89■□□□□ 0.61
CCL2P13500 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.89■□□□□ 0.61
CCL2P13500 AC105265.2-201ENST00000467189 838 ntBASIC18.89■□□□□ 0.61
CCL2P13500 IGHV3-19-201ENST00000521488 291 ntBASIC18.89■□□□□ 0.61
CCL2P13500 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.89■□□□□ 0.61
CCL2P13500 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCL2P13500 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCL2P13500 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL2P13500 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL2P13500 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL2P13500 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL2P13500 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCL2P13500 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL2P13500 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCL2P13500 AC127496.7-201ENST00000625110 1798 ntBASIC18.88■□□□□ 0.61
CCL2P13500 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCL2P13500 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL2P13500 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.88■□□□□ 0.61
CCL2P13500 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL2P13500 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCL2P13500 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.88■□□□□ 0.61
CCL2P13500 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL2P13500 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.88■□□□□ 0.61
CCL2P13500 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL2P13500 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL2P13500 EP400NL-214ENST00000641289 2402 ntBASIC18.88■□□□□ 0.61
CCL2P13500 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL2P13500 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL2P13500 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCL2P13500 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.87■□□□□ 0.61
CCL2P13500 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.87■□□□□ 0.61
CCL2P13500 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
CCL2P13500 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.87■□□□□ 0.61
CCL2P13500 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL2P13500 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCL2P13500 AC139530.1-201ENST00000575312 1977 ntBASIC18.87■□□□□ 0.61
CCL2P13500 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL2P13500 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.87■□□□□ 0.61
CCL2P13500 AL117328.2-201ENST00000624617 1940 ntBASIC18.87■□□□□ 0.61
CCL2P13500 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL2P13500 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCL2P13500 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CCL2P13500 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL2P13500 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL2P13500 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCL2P13500 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL2P13500 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCL2P13500 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCL2P13500 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCL2P13500 OXCT2P1-201ENST00000447263 1535 ntBASIC18.85■□□□□ 0.61
CCL2P13500 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCL2P13500 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.85■□□□□ 0.61
CCL2P13500 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCL2P13500 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCL2P13500 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.85■□□□□ 0.61
CCL2P13500 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.85■□□□□ 0.61
CCL2P13500 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCL2P13500 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.85■□□□□ 0.61
CCL2P13500 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.85■□□□□ 0.61
CCL2P13500 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCL2P13500 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.84■□□□□ 0.61
CCL2P13500 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.84■□□□□ 0.61
CCL2P13500 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 AC079089.2-201ENST00000531211 1277 ntBASIC18.84■□□□□ 0.61
CCL2P13500 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.84■□□□□ 0.61
CCL2P13500 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.84■□□□□ 0.61
CCL2P13500 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CCL2P13500 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCL2P13500 LINC00526-201ENST00000581067 1875 ntBASIC18.84■□□□□ 0.61
CCL2P13500 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.83■□□□□ 0.61
CCL2P13500 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms