Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 FP325331.1-202ENST00000623531 1380 ntBASIC17.4■□□□□ 0.38
MT-CO2P00403 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO2P00403 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MT-CO2P00403 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO2P00403 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO2P00403 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO2P00403 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO2P00403 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
MT-CO2P00403 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO2P00403 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO2P00403 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
MT-CO2P00403 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO2P00403 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO2P00403 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO2P00403 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MT-CO2P00403 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO2P00403 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO2P00403 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MT-CO2P00403 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
MT-CO2P00403 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
MT-CO2P00403 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MT-CO2P00403 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
MT-CO2P00403 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MT-CO2P00403 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MT-CO2P00403 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MT-CO2P00403 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-CO2P00403 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.39■□□□□ 0.37
MT-CO2P00403 AC239859.2-201ENST00000444165 318 ntBASIC17.39■□□□□ 0.37
MT-CO2P00403 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MT-CO2P00403 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO2P00403 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO2P00403 AIRN-201ENST00000601203 4374 ntBASIC17.39■□□□□ 0.37
MT-CO2P00403 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.39■□□□□ 0.37
MT-CO2P00403 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MT-CO2P00403 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MT-CO2P00403 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO2P00403 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO2P00403 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MT-CO2P00403 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-CO2P00403 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO2P00403 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
MT-CO2P00403 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO2P00403 AL137060.1-201ENST00000618151 2648 ntBASIC17.38■□□□□ 0.37
MT-CO2P00403 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO2P00403 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-CO2P00403 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-CO2P00403 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-CO2P00403 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MT-CO2P00403 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MT-CO2P00403 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
MT-CO2P00403 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
MT-CO2P00403 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MT-CO2P00403 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MT-CO2P00403 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.37■□□□□ 0.37
MT-CO2P00403 TSPY9P-201ENST00000440215 945 ntBASIC17.37■□□□□ 0.37
MT-CO2P00403 TSPY11P-201ENST00000442607 1045 ntBASIC17.37■□□□□ 0.37
MT-CO2P00403 AC010997.5-201ENST00000609182 354 ntBASIC17.37■□□□□ 0.37
MT-CO2P00403 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.37■□□□□ 0.37
MT-CO2P00403 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-CO2P00403 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.36■□□□□ 0.37
MT-CO2P00403 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MT-CO2P00403 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.36■□□□□ 0.37
MT-CO2P00403 AC009299.2-201ENST00000482477 511 ntBASIC17.36■□□□□ 0.37
MT-CO2P00403 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.36■□□□□ 0.37
MT-CO2P00403 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.36■□□□□ 0.37
MT-CO2P00403 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MT-CO2P00403 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-CO2P00403 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.36■□□□□ 0.37
MT-CO2P00403 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MT-CO2P00403 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO2P00403 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO2P00403 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO2P00403 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO2P00403 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO2P00403 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO2P00403 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO2P00403 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-CO2P00403 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-CO2P00403 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms