Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 TBCB-214ENST00000629269 413 ntTSL 5 BASIC33.06■■■□□ 2.88
AFAP1Q8N556 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
AFAP1Q8N556 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC33.05■■■□□ 2.88
AFAP1Q8N556 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
AFAP1Q8N556 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
AFAP1Q8N556 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
AFAP1Q8N556 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC33.05■■■□□ 2.88
AFAP1Q8N556 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC33.05■■■□□ 2.88
AFAP1Q8N556 PXK-203ENST00000383715 1756 ntTSL 5 BASIC33.05■■■□□ 2.88
AFAP1Q8N556 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
AFAP1Q8N556 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
AFAP1Q8N556 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
AFAP1Q8N556 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
AFAP1Q8N556 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC33.04■■■□□ 2.88
AFAP1Q8N556 AC133041.1-202ENST00000642053 222 ntBASIC33.04■■■□□ 2.88
AFAP1Q8N556 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
AFAP1Q8N556 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
AFAP1Q8N556 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
AFAP1Q8N556 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
AFAP1Q8N556 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
AFAP1Q8N556 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC33.03■■■□□ 2.88
AFAP1Q8N556 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
AFAP1Q8N556 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC33.03■■■□□ 2.88
AFAP1Q8N556 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
AFAP1Q8N556 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
AFAP1Q8N556 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
AFAP1Q8N556 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
AFAP1Q8N556 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
AFAP1Q8N556 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
AFAP1Q8N556 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC33.02■■■□□ 2.88
AFAP1Q8N556 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC33.02■■■□□ 2.88
AFAP1Q8N556 AP001160.3-201ENST00000601484 763 ntBASIC33.02■■■□□ 2.88
AFAP1Q8N556 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
AFAP1Q8N556 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
AFAP1Q8N556 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
AFAP1Q8N556 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.88
AFAP1Q8N556 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
AFAP1Q8N556 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC33.01■■■□□ 2.87
AFAP1Q8N556 AF201337.1-201ENST00000520239 748 ntBASIC33.01■■■□□ 2.87
AFAP1Q8N556 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC33.01■■■□□ 2.87
AFAP1Q8N556 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
AFAP1Q8N556 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
AFAP1Q8N556 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
AFAP1Q8N556 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
AFAP1Q8N556 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
AFAP1Q8N556 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
AFAP1Q8N556 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC33■■■□□ 2.87
AFAP1Q8N556 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC33■■■□□ 2.87
AFAP1Q8N556 AC133552.2-202ENST00000575694 574 ntBASIC33■■■□□ 2.87
AFAP1Q8N556 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC33■■■□□ 2.87
AFAP1Q8N556 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC33■■■□□ 2.87
AFAP1Q8N556 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
AFAP1Q8N556 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
AFAP1Q8N556 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
AFAP1Q8N556 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
AFAP1Q8N556 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
AFAP1Q8N556 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
AFAP1Q8N556 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
AFAP1Q8N556 AC009237.3-201ENST00000393279 1427 ntBASIC32.98■■■□□ 2.87
AFAP1Q8N556 APTR-203ENST00000430801 583 ntTSL 5 BASIC32.98■■■□□ 2.87
AFAP1Q8N556 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC32.98■■■□□ 2.87
AFAP1Q8N556 AC105036.2-201ENST00000569468 176 ntBASIC32.98■■■□□ 2.87
AFAP1Q8N556 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
AFAP1Q8N556 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
AFAP1Q8N556 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
AFAP1Q8N556 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC32.97■■■□□ 2.87
AFAP1Q8N556 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
AFAP1Q8N556 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC32.97■■■□□ 2.87
AFAP1Q8N556 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC32.97■■■□□ 2.87
AFAP1Q8N556 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
AFAP1Q8N556 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC32.97■■■□□ 2.87
AFAP1Q8N556 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC32.97■■■□□ 2.87
AFAP1Q8N556 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
AFAP1Q8N556 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
AFAP1Q8N556 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
AFAP1Q8N556 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
AFAP1Q8N556 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
AFAP1Q8N556 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
AFAP1Q8N556 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
AFAP1Q8N556 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC32.96■■■□□ 2.87
AFAP1Q8N556 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
AFAP1Q8N556 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
AFAP1Q8N556 AC142381.3-201ENST00000568208 1670 ntBASIC32.95■■■□□ 2.87
AFAP1Q8N556 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
AFAP1Q8N556 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC32.95■■■□□ 2.86
AFAP1Q8N556 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC32.95■■■□□ 2.86
AFAP1Q8N556 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC32.95■■■□□ 2.86
AFAP1Q8N556 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC32.94■■■□□ 2.86
AFAP1Q8N556 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
AFAP1Q8N556 DUSP8P3-201ENST00000399571 1760 ntBASIC32.94■■■□□ 2.86
AFAP1Q8N556 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
AFAP1Q8N556 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC32.94■■■□□ 2.86
AFAP1Q8N556 POU5F1P3-201ENST00000428824 1078 ntBASIC32.94■■■□□ 2.86
AFAP1Q8N556 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
AFAP1Q8N556 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
AFAP1Q8N556 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC32.94■■■□□ 2.86
AFAP1Q8N556 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC32.94■■■□□ 2.86
AFAP1Q8N556 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
AFAP1Q8N556 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC32.94■■■□□ 2.86
AFAP1Q8N556 EED-207ENST00000528180 1745 ntTSL 5 BASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms