Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MFSD11-216ENST00000590393 1141 ntBASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 TMEM191A-211ENST00000637163 1067 ntBASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 AC004812.2-201ENST00000611079 2094 ntBASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 LINC00543-201ENST00000567234 1845 ntBASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEFF1Q8IYR6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
TMEFF1Q8IYR6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEFF1Q8IYR6 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEFF1Q8IYR6 CD99P1-205ENST00000527459 561 ntBASIC21.7■■□□□ 1.06
TMEFF1Q8IYR6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.7■■□□□ 1.06
TMEFF1Q8IYR6 AC104187.1-201ENST00000607510 612 ntBASIC21.7■■□□□ 1.06
TMEFF1Q8IYR6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEFF1Q8IYR6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEFF1Q8IYR6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEFF1Q8IYR6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 AC083906.2-201ENST00000511578 360 ntBASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 AL121832.2-201ENST00000610979 668 ntBASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 AL050303.2-201ENST00000619798 666 ntBASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEFF1Q8IYR6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 ABCB10P4-201ENST00000566803 2184 ntBASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 AC005224.4-201ENST00000583262 1652 ntBASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMEFF1Q8IYR6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEFF1Q8IYR6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEFF1Q8IYR6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEFF1Q8IYR6 TSPY20P-201ENST00000450910 630 ntBASIC21.65■■□□□ 1.06
TMEFF1Q8IYR6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMEFF1Q8IYR6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.65■■□□□ 1.06
TMEFF1Q8IYR6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMEFF1Q8IYR6 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.65■■□□□ 1.06
TMEFF1Q8IYR6 KRT87P-202ENST00000534226 1464 ntBASIC21.64■■□□□ 1.06
TMEFF1Q8IYR6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMEFF1Q8IYR6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TMEFF1Q8IYR6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.64■■□□□ 1.06
TMEFF1Q8IYR6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 AC142086.2-201ENST00000569753 217 ntBASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMEFF1Q8IYR6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.63■■□□□ 1.05
TMEFF1Q8IYR6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms