Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.03■■□□□ 1.44
COL1A2P08123 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.03■■□□□ 1.44
COL1A2P08123 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL1A2P08123 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL1A2P08123 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL1A2P08123 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
COL1A2P08123 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
COL1A2P08123 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL1A2P08123 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.03■■□□□ 1.44
COL1A2P08123 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.03■■□□□ 1.44
COL1A2P08123 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.03■■□□□ 1.44
COL1A2P08123 AC079140.4-201ENST00000507448 529 ntBASIC24.03■■□□□ 1.44
COL1A2P08123 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.03■■□□□ 1.44
COL1A2P08123 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL1A2P08123 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL1A2P08123 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL1A2P08123 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.02■■□□□ 1.44
COL1A2P08123 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL1A2P08123 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL1A2P08123 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.02■■□□□ 1.44
COL1A2P08123 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL1A2P08123 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL1A2P08123 AC004911.1-201ENST00000416316 871 ntBASIC24.02■■□□□ 1.44
COL1A2P08123 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.02■■□□□ 1.44
COL1A2P08123 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.02■■□□□ 1.44
COL1A2P08123 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.01■■□□□ 1.43
COL1A2P08123 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.01■■□□□ 1.43
COL1A2P08123 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A2P08123 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A2P08123 AC006015.1-201ENST00000429970 570 ntBASIC24.01■■□□□ 1.43
COL1A2P08123 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.01■■□□□ 1.43
COL1A2P08123 AC090192.1-201ENST00000517740 490 ntBASIC24.01■■□□□ 1.43
COL1A2P08123 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.01■■□□□ 1.43
COL1A2P08123 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
COL1A2P08123 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
COL1A2P08123 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24■■□□□ 1.43
COL1A2P08123 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL1A2P08123 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24■■□□□ 1.43
COL1A2P08123 KRT19P1-201ENST00000405746 1186 ntBASIC24■■□□□ 1.43
COL1A2P08123 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24■■□□□ 1.43
COL1A2P08123 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24■■□□□ 1.43
COL1A2P08123 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
COL1A2P08123 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24■■□□□ 1.43
COL1A2P08123 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24■■□□□ 1.43
COL1A2P08123 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A2P08123 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A2P08123 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A2P08123 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.99■■□□□ 1.43
COL1A2P08123 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A2P08123 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A2P08123 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.99■■□□□ 1.43
COL1A2P08123 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.99■■□□□ 1.43
COL1A2P08123 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.99■■□□□ 1.43
COL1A2P08123 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.99■■□□□ 1.43
COL1A2P08123 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A2P08123 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
COL1A2P08123 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
COL1A2P08123 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COL1A2P08123 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL1A2P08123 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
COL1A2P08123 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.98■■□□□ 1.43
COL1A2P08123 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.98■■□□□ 1.43
COL1A2P08123 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.98■■□□□ 1.43
COL1A2P08123 AC137761.2-201ENST00000561729 223 ntBASIC23.98■■□□□ 1.43
COL1A2P08123 AC145350.3-201ENST00000569033 163 ntBASIC23.98■■□□□ 1.43
COL1A2P08123 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
COL1A2P08123 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.98■■□□□ 1.43
COL1A2P08123 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
COL1A2P08123 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.98■■□□□ 1.43
COL1A2P08123 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A2P08123 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A2P08123 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.97■■□□□ 1.43
COL1A2P08123 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.97■■□□□ 1.43
COL1A2P08123 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.97■■□□□ 1.43
COL1A2P08123 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.97■■□□□ 1.43
COL1A2P08123 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.97■■□□□ 1.43
COL1A2P08123 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.97■■□□□ 1.43
COL1A2P08123 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.97■■□□□ 1.43
COL1A2P08123 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
COL1A2P08123 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COL1A2P08123 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A2P08123 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A2P08123 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A2P08123 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A2P08123 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A2P08123 AC016769.1-201ENST00000409132 1010 ntBASIC23.96■■□□□ 1.43
COL1A2P08123 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
COL1A2P08123 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A2P08123 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.96■■□□□ 1.43
COL1A2P08123 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.96■■□□□ 1.43
COL1A2P08123 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A2P08123 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.96■■□□□ 1.43
COL1A2P08123 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A2P08123 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A2P08123 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A2P08123 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.95■■□□□ 1.42
COL1A2P08123 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.95■■□□□ 1.42
COL1A2P08123 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A2P08123 KRT87P-202ENST00000534226 1464 ntBASIC23.95■■□□□ 1.42
COL1A2P08123 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms