Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV9A0A0B4J1U6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV9A0A0B4J1U6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 AC131212.1-201ENST00000613771 668 ntBASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV9A0A0B4J1U6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 AC006455.2-201ENST00000429931 906 ntBASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV9A0A0B4J1U6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV9A0A0B4J1U6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRBV9A0A0B4J1U6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV9A0A0B4J1U6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 DUX4L19-201ENST00000557448 1267 ntBASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV9A0A0B4J1U6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 pRNA.6-201ENST00000610482 90 ntBASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 pRNA.5-201ENST00000612139 90 ntBASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 pRNA.11-201ENST00000618423 90 ntBASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 pRNA.13-201ENST00000619112 90 ntBASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 AC004687.1-201ENST00000579003 1625 ntBASIC17.24■□□□□ 0.35
TRBV9A0A0B4J1U6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms