Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.64■□□□□ 0.41
NKX6-2Q9C056 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 AL161729.1-201ENST00000604104 1402 ntBASIC17.63■□□□□ 0.41
NKX6-2Q9C056 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX6-2Q9C056 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NKX6-2Q9C056 LINC01006-201ENST00000333319 2292 ntBASIC17.61■□□□□ 0.41
NKX6-2Q9C056 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 AC010542.4-201ENST00000563151 1910 ntBASIC17.61■□□□□ 0.41
NKX6-2Q9C056 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX6-2Q9C056 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX6-2Q9C056 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 AC026471.1-201ENST00000564629 3026 ntBASIC17.59■□□□□ 0.41
NKX6-2Q9C056 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX6-2Q9C056 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX6-2Q9C056 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX6-2Q9C056 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX6-2Q9C056 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX6-2Q9C056 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 AC079630.1-202ENST00000618127 1840 ntBASIC17.58■□□□□ 0.4
NKX6-2Q9C056 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX6-2Q9C056 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.58■□□□□ 0.4
NKX6-2Q9C056 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms