Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GFI1Q99684 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFI1Q99684 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GFI1Q99684 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFI1Q99684 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.88■□□□□ 0.61
GFI1Q99684 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFI1Q99684 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFI1Q99684 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFI1Q99684 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFI1Q99684 Z98882.1-201ENST00000622160 2253 ntBASIC18.88■□□□□ 0.61
GFI1Q99684 AC009086.3-201ENST00000623486 1008 ntBASIC18.88■□□□□ 0.61
GFI1Q99684 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.88■□□□□ 0.61
GFI1Q99684 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GFI1Q99684 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
GFI1Q99684 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFI1Q99684 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
GFI1Q99684 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
GFI1Q99684 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.87■□□□□ 0.61
GFI1Q99684 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.87■□□□□ 0.61
GFI1Q99684 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.87■□□□□ 0.61
GFI1Q99684 AC074183.2-201ENST00000623112 922 ntBASIC18.87■□□□□ 0.61
GFI1Q99684 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFI1Q99684 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFI1Q99684 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFI1Q99684 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GFI1Q99684 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFI1Q99684 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.86■□□□□ 0.61
GFI1Q99684 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
GFI1Q99684 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GFI1Q99684 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.86■□□□□ 0.61
GFI1Q99684 AC004987.1-201ENST00000428627 508 ntBASIC18.86■□□□□ 0.61
GFI1Q99684 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFI1Q99684 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
GFI1Q99684 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GFI1Q99684 FEM1AP4-201ENST00000443167 1987 ntBASIC18.86■□□□□ 0.61
GFI1Q99684 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.86■□□□□ 0.61
GFI1Q99684 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFI1Q99684 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFI1Q99684 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GFI1Q99684 AC004687.1-201ENST00000579003 1625 ntBASIC18.85■□□□□ 0.61
GFI1Q99684 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.85■□□□□ 0.61
GFI1Q99684 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GFI1Q99684 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.85■□□□□ 0.61
GFI1Q99684 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFI1Q99684 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.85■□□□□ 0.61
GFI1Q99684 ATP5G2P3-201ENST00000429083 425 ntBASIC18.85■□□□□ 0.61
GFI1Q99684 NTF6A-201ENST00000591175 560 ntBASIC18.85■□□□□ 0.61
GFI1Q99684 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.85■□□□□ 0.61
GFI1Q99684 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GFI1Q99684 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GFI1Q99684 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.84■□□□□ 0.61
GFI1Q99684 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.84■□□□□ 0.61
GFI1Q99684 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.84■□□□□ 0.61
GFI1Q99684 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GFI1Q99684 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.84■□□□□ 0.61
GFI1Q99684 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GFI1Q99684 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GFI1Q99684 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFI1Q99684 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.83■□□□□ 0.61
GFI1Q99684 AL157384.1-201ENST00000445995 2473 ntBASIC18.83■□□□□ 0.61
GFI1Q99684 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GFI1Q99684 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFI1Q99684 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFI1Q99684 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFI1Q99684 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GFI1Q99684 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
GFI1Q99684 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GFI1Q99684 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GFI1Q99684 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFI1Q99684 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.83■□□□□ 0.6
GFI1Q99684 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GFI1Q99684 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.83■□□□□ 0.6
GFI1Q99684 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GFI1Q99684 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GFI1Q99684 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GFI1Q99684 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.82■□□□□ 0.6
GFI1Q99684 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GFI1Q99684 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.82■□□□□ 0.6
GFI1Q99684 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GFI1Q99684 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.82■□□□□ 0.6
GFI1Q99684 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms