Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEFF1Q8IYR6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMEFF1Q8IYR6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.82■■□□□ 1.08
TMEFF1Q8IYR6 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 AC079140.4-201ENST00000507448 529 ntBASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
TMEFF1Q8IYR6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 KRT18P11-201ENST00000435214 1283 ntBASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMEFF1Q8IYR6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMEFF1Q8IYR6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEFF1Q8IYR6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEFF1Q8IYR6 AL353803.4-201ENST00000565882 1934 ntBASIC21.77■■□□□ 1.08
TMEFF1Q8IYR6 GPX1P1-201ENST00000388829 606 ntBASIC21.77■■□□□ 1.08
TMEFF1Q8IYR6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TMEFF1Q8IYR6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TMEFF1Q8IYR6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TMEFF1Q8IYR6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEFF1Q8IYR6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.77■■□□□ 1.08
TMEFF1Q8IYR6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TMEFF1Q8IYR6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEFF1Q8IYR6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEFF1Q8IYR6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEFF1Q8IYR6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEFF1Q8IYR6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEFF1Q8IYR6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEFF1Q8IYR6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEFF1Q8IYR6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEFF1Q8IYR6 OXCT2P1-201ENST00000447263 1535 ntBASIC21.75■■□□□ 1.07
TMEFF1Q8IYR6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TMEFF1Q8IYR6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TMEFF1Q8IYR6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.72■■□□□ 1.07
TMEFF1Q8IYR6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms