Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.96■■■□□ 2.07
COL15A1P39059 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
COL15A1P39059 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
COL15A1P39059 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
COL15A1P39059 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
COL15A1P39059 MIR663A-201ENST00000385250 93 ntBASIC27.94■■■□□ 2.06
COL15A1P39059 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
COL15A1P39059 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
COL15A1P39059 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.94■■■□□ 2.06
COL15A1P39059 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.94■■■□□ 2.06
COL15A1P39059 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
COL15A1P39059 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.94■■■□□ 2.06
COL15A1P39059 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.94■■■□□ 2.06
COL15A1P39059 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
COL15A1P39059 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.93■■■□□ 2.06
COL15A1P39059 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
COL15A1P39059 AL355802.2-201ENST00000402069 882 ntBASIC27.93■■■□□ 2.06
COL15A1P39059 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.93■■■□□ 2.06
COL15A1P39059 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.92■■■□□ 2.06
COL15A1P39059 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.92■■■□□ 2.06
COL15A1P39059 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL15A1P39059 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL15A1P39059 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.92■■■□□ 2.06
COL15A1P39059 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC27.92■■■□□ 2.06
COL15A1P39059 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.92■■■□□ 2.06
COL15A1P39059 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.92■■■□□ 2.06
COL15A1P39059 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC27.92■■■□□ 2.06
COL15A1P39059 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
COL15A1P39059 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.91■■■□□ 2.06
COL15A1P39059 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
COL15A1P39059 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
COL15A1P39059 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.91■■■□□ 2.06
COL15A1P39059 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.91■■■□□ 2.06
COL15A1P39059 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
COL15A1P39059 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
COL15A1P39059 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.91■■■□□ 2.06
COL15A1P39059 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
COL15A1P39059 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL15A1P39059 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.9■■■□□ 2.06
COL15A1P39059 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL15A1P39059 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
COL15A1P39059 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
COL15A1P39059 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC27.9■■■□□ 2.06
COL15A1P39059 AL109923.1-201ENST00000618799 583 ntBASIC27.9■■■□□ 2.06
COL15A1P39059 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
COL15A1P39059 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
COL15A1P39059 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
COL15A1P39059 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL15A1P39059 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.89■■■□□ 2.06
COL15A1P39059 NCF1B-203ENST00000435988 1254 ntBASIC27.89■■■□□ 2.06
COL15A1P39059 AC079140.4-201ENST00000507448 529 ntBASIC27.89■■■□□ 2.06
COL15A1P39059 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.89■■■□□ 2.06
COL15A1P39059 AC011767.1-201ENST00000617410 1153 ntBASIC27.89■■■□□ 2.06
COL15A1P39059 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL15A1P39059 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
COL15A1P39059 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL15A1P39059 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL15A1P39059 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
COL15A1P39059 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL15A1P39059 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL15A1P39059 AL353803.4-201ENST00000565882 1934 ntBASIC27.88■■■□□ 2.05
COL15A1P39059 ABHD17AP1-201ENST00000358206 933 ntBASIC27.88■■■□□ 2.05
COL15A1P39059 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.88■■■□□ 2.05
COL15A1P39059 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC27.88■■■□□ 2.05
COL15A1P39059 KRT18P11-201ENST00000435214 1283 ntBASIC27.88■■■□□ 2.05
COL15A1P39059 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.88■■■□□ 2.05
COL15A1P39059 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.88■■■□□ 2.05
COL15A1P39059 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.88■■■□□ 2.05
COL15A1P39059 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL15A1P39059 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
COL15A1P39059 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
COL15A1P39059 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL15A1P39059 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL15A1P39059 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.87■■■□□ 2.05
COL15A1P39059 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
COL15A1P39059 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
COL15A1P39059 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
COL15A1P39059 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
COL15A1P39059 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.87■■■□□ 2.05
COL15A1P39059 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
COL15A1P39059 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL15A1P39059 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.86■■■□□ 2.05
COL15A1P39059 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
COL15A1P39059 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.86■■■□□ 2.05
COL15A1P39059 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL15A1P39059 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL15A1P39059 AC093323.1-202ENST00000635031 2045 ntBASIC27.86■■■□□ 2.05
COL15A1P39059 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
COL15A1P39059 ESRRAP2-201ENST00000418437 1549 ntBASIC27.86■■■□□ 2.05
COL15A1P39059 AC092068.2-201ENST00000590491 1708 ntBASIC27.85■■■□□ 2.05
COL15A1P39059 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.85■■■□□ 2.05
COL15A1P39059 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.85■■■□□ 2.05
COL15A1P39059 OXCT2P1-201ENST00000447263 1535 ntBASIC27.85■■■□□ 2.05
COL15A1P39059 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL15A1P39059 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
COL15A1P39059 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27.85■■■□□ 2.05
COL15A1P39059 MFSD11-216ENST00000590393 1141 ntBASIC27.85■■■□□ 2.05
COL15A1P39059 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL15A1P39059 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL15A1P39059 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms