Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.073e-6■■□□□ 12.1
FUBP3Q96I24 PPP1R26-203ENST00000602993 409 ntTSL 413.06□□□□□ -0.326e-8■■□□□ 12.1
FUBP3Q96I24 WAC-204ENST00000375646 2176 ntTSL 5 BASIC13.05□□□□□ -0.323e-6■■□□□ 12.1
FUBP3Q96I24 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC12.39□□□□□ -0.433e-6■■□□□ 12.1
FUBP3Q96I24 ZC3H11A-206ENST00000453771 1892 ntTSL 511.72□□□□□ -0.536e-8■■□□□ 12.1
FUBP3Q96I24 VGLL4-213ENST00000445411 726 ntTSL 510.12□□□□□ -0.793e-6■■□□□ 12.1
FUBP3Q96I24 ZC3H11A-205ENST00000432282 682 ntTSL 59.94□□□□□ -0.826e-8■■□□□ 12.1
FUBP3Q96I24 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC9.64□□□□□ -0.873e-6■■□□□ 12.1
FUBP3Q96I24 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.93e-6■■□□□ 12.1
FUBP3Q96I24 CSNK2A1-210ENST00000619801 655 ntTSL 39.36□□□□□ -0.913e-6■■□□□ 12.1
FUBP3Q96I24 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.033e-6■■□□□ 12.1
FUBP3Q96I24 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.136e-8■■□□□ 12.1
FUBP3Q96I24 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.85□□□□□ -1.153e-6■■□□□ 12.1
FUBP3Q96I24 CREBZF-207ENST00000528889 745 ntTSL 37.71□□□□□ -1.183e-6■■□□□ 12.1
FUBP3Q96I24 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.73□□□□□ -1.333e-6■■□□□ 12.1
FUBP3Q96I24 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.353e-6■■□□□ 12.1
FUBP3Q96I24 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.366e-8■■□□□ 12.1
FUBP3Q96I24 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.22□□□□□ -1.413e-6■■□□□ 12.1
FUBP3Q96I24 WAC-210ENST00000439676 2762 ntTSL 54.72□□□□□ -1.653e-6■■□□□ 12.1
FUBP3Q96I24 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.59□□□□□ -1.683e-6■■□□□ 12.1
FUBP3Q96I24 WAC-201ENST00000345541 4526 ntTSL 1 (best)3.88□□□□□ -1.793e-6■■□□□ 12.1
FUBP3Q96I24 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.061e-10■■□□□ 12
FUBP3Q96I24 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.451e-10■■□□□ 12
FUBP3Q96I24 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.541e-10■■□□□ 12
FUBP3Q96I24 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.956e-11■■□□□ 12
FUBP3Q96I24 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.117e-21■■□□□ 12
FUBP3Q96I24 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.027e-21■■□□□ 12
FUBP3Q96I24 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.73□□□□□ -0.057e-21■■□□□ 12
FUBP3Q96I24 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.057e-21■■□□□ 12
FUBP3Q96I24 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.73□□□□□ -0.057e-21■■□□□ 12
FUBP3Q96I24 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.197e-21■■□□□ 12
FUBP3Q96I24 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC12.62□□□□□ -0.397e-21■■□□□ 12
FUBP3Q96I24 CNBP-206ENST00000502372 1026 ntTSL 510.86□□□□□ -0.677e-21■■□□□ 12
FUBP3Q96I24 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.996e-11■■□□□ 12
FUBP3Q96I24 SMARCAD1-202ENST00000359052 5017 ntAPPRIS ALT1 TSL 1 (best)2.43□□□□□ -2.026e-11■■□□□ 12
FUBP3Q96I24 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8□□□□□ -1.138e-26■■□□□ 12
FUBP3Q96I24 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.868e-26■■□□□ 12
FUBP3Q96I24 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.48e-15■■□□□ 11.9
FUBP3Q96I24 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.148e-15■■□□□ 11.9
FUBP3Q96I24 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.77■■■□□ 2.048e-15■■□□□ 11.9
FUBP3Q96I24 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 28e-15■■□□□ 11.9
FUBP3Q96I24 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.48■■□□□ 1.998e-15■■□□□ 11.9
FUBP3Q96I24 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.528e-15■■□□□ 11.9
FUBP3Q96I24 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.418e-15■■□□□ 11.9
FUBP3Q96I24 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.668e-15■■□□□ 11.9
FUBP3Q96I24 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.568e-15■■□□□ 11.9
FUBP3Q96I24 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.028e-15■■□□□ 11.9
FUBP3Q96I24 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.198e-15■■□□□ 11.9
FUBP3Q96I24 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.268e-15■■□□□ 11.9
FUBP3Q96I24 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.348e-15■■□□□ 11.9
FUBP3Q96I24 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.114e-6■■□□□ 11.9
FUBP3Q96I24 RFX7-202ENST00000559847 4165 ntTSL 1 (best)4.46□□□□□ -1.71e-7■■□□□ 11.9
FUBP3Q96I24 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.532e-6■■□□□ 11.9
FUBP3Q96I24 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.052e-6■■□□□ 11.9
FUBP3Q96I24 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.092e-6■■□□□ 11.9
FUBP3Q96I24 PKP4-205ENST00000426248 4134 ntTSL 1 (best)15.92■□□□□ 0.144e-6■■□□□ 11.9
FUBP3Q96I24 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.754e-6■■□□□ 11.9
FUBP3Q96I24 PKP4-210ENST00000480171 2772 ntTSL 28.6□□□□□ -1.034e-6■■□□□ 11.9
FUBP3Q96I24 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.064e-6■■□□□ 11.9
FUBP3Q96I24 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.738e-12■■□□□ 11.8
FUBP3Q96I24 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)8.07□□□□□ -1.128e-12■■□□□ 11.8
FUBP3Q96I24 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)7.89□□□□□ -1.158e-12■■□□□ 11.8
FUBP3Q96I24 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.28e-12■■□□□ 11.8
FUBP3Q96I24 EIF4A2-202ENST00000425053 1977 ntTSL 55.75□□□□□ -1.498e-12■■□□□ 11.8
FUBP3Q96I24 EIF4A2-219ENST00000485101 5327 ntTSL 54.15□□□□□ -1.758e-12■■□□□ 11.8
FUBP3Q96I24 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.532e-9■■□□□ 11.8
FUBP3Q96I24 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.532e-9■■□□□ 11.8
FUBP3Q96I24 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.722e-6■■□□□ 11.8
FUBP3Q96I24 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.959e-9■■□□□ 11.8
FUBP3Q96I24 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.989e-9■■□□□ 11.8
FUBP3Q96I24 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.099e-9■■□□□ 11.8
FUBP3Q96I24 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.119e-9■■□□□ 11.8
FUBP3Q96I24 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.239e-9■■□□□ 11.8
FUBP3Q96I24 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.084e-7■■□□□ 11.8
FUBP3Q96I24 YIPF4-202ENST00000437765 728 ntTSL 56.44□□□□□ -1.384e-7■■□□□ 11.8
FUBP3Q96I24 YIPF4-203ENST00000441084 312 ntTSL 35.17□□□□□ -1.584e-7■■□□□ 11.8
FUBP3Q96I24 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.011e-6■■□□□ 11.8
FUBP3Q96I24 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.924e-22■■□□□ 11.8
FUBP3Q96I24 ICAM1-201ENST00000264832 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.825e-6■■□□□ 11.7
FUBP3Q96I24 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.06■■□□□ 1.123e-7■■□□□ 11.7
FUBP3Q96I24 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.873e-7■■□□□ 11.7
FUBP3Q96I24 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.63e-7■■□□□ 11.7
FUBP3Q96I24 TMEM237-201ENST00000286196 1805 ntTSL 518.72■□□□□ 0.593e-7■■□□□ 11.7
FUBP3Q96I24 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.343e-7■■□□□ 11.7
FUBP3Q96I24 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.111e-10■■□□□ 11.7
FUBP3Q96I24 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.033e-7■■□□□ 11.7
FUBP3Q96I24 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.74□□□□□ -0.052e-9■■□□□ 11.7
FUBP3Q96I24 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.143e-7■■□□□ 11.7
FUBP3Q96I24 REEP5-206ENST00000511865 1187 ntTSL 212.79□□□□□ -0.362e-9■■□□□ 11.7
FUBP3Q96I24 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC11.61□□□□□ -0.553e-7■■□□□ 11.7
FUBP3Q96I24 TMEM237-203ENST00000409883 5415 ntAPPRIS P4 TSL 5 BASIC9.75□□□□□ -0.853e-7■■□□□ 11.7
FUBP3Q96I24 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.923e-7■■□□□ 11.7
FUBP3Q96I24 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.48□□□□□ -1.213e-7■■□□□ 11.7
FUBP3Q96I24 TMEM237-209ENST00000471318 828 ntTSL 36.09□□□□□ -1.433e-7■■□□□ 11.7
FUBP3Q96I24 TMEM237-212ENST00000495329 4435 ntTSL 24.56□□□□□ -1.683e-7■■□□□ 11.7
FUBP3Q96I24 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.353e-8■■□□□ 11.7
FUBP3Q96I24 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.383e-8■■□□□ 11.7
FUBP3Q96I24 ZC3H11A-213ENST00000638800 7078 ntTSL 55.63□□□□□ -1.513e-8■■□□□ 11.7
FUBP3Q96I24 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.543e-8■■□□□ 11.7
FUBP3Q96I24 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.14□□□□□ -1.593e-8■■□□□ 11.7
Retrieved 100 of 4,568 protein–RNA pairs in 124.1 ms