RNA–Protein interactions for RNA: ENST00000502897.5

SUB1-203, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-203ENST00000502897 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
SUB1-203ENST00000502897 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
SUB1-203ENST00000502897 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
SUB1-203ENST00000502897 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
SUB1-203ENST00000502897 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
SUB1-203ENST00000502897 FOXD1Q16676 465 aa16.87■□□□□ 0.29
SUB1-203ENST00000502897 ADRA2BP18089 450 aa16.35■□□□□ 0.21
SUB1-203ENST00000502897 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
SUB1-203ENST00000502897 PIAS4Q8N2W9 510 aaPredicted RBP15.93■□□□□ 0.14
SUB1-203ENST00000502897 MSH5O43196 834 aa15.42■□□□□ 0.06
SUB1-203ENST00000502897 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
SUB1-203ENST00000502897 KCNA4P22459 653 aa14.86□□□□□ -0.03
SUB1-203ENST00000502897 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
SUB1-203ENST00000502897 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
SUB1-203ENST00000502897 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
SUB1-203ENST00000502897 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
SUB1-203ENST00000502897 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
SUB1-203ENST00000502897 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
SUB1-203ENST00000502897 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
SUB1-203ENST00000502897 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
SUB1-203ENST00000502897 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
SUB1-203ENST00000502897 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
SUB1-203ENST00000502897 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
SUB1-203ENST00000502897 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
SUB1-203ENST00000502897 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
SUB1-203ENST00000502897 ZBTB22O15209 634 aa13.68□□□□□ -0.22
SUB1-203ENST00000502897 SLC4A2P04920 1241 aa13.66□□□□□ -0.22
SUB1-203ENST00000502897 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
SUB1-203ENST00000502897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.23
SUB1-203ENST00000502897 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
SUB1-203ENST00000502897 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
SUB1-203ENST00000502897 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
SUB1-203ENST00000502897 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
SUB1-203ENST00000502897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
SUB1-203ENST00000502897 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
SUB1-203ENST00000502897 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
SUB1-203ENST00000502897 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
SUB1-203ENST00000502897 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
SUB1-203ENST00000502897 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
SUB1-203ENST00000502897 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
SUB1-203ENST00000502897 CAPN15O75808 1086 aa12.98□□□□□ -0.33
SUB1-203ENST00000502897 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
SUB1-203ENST00000502897 APLP2Q06481 763 aa12.96□□□□□ -0.33
SUB1-203ENST00000502897 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
SUB1-203ENST00000502897 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
SUB1-203ENST00000502897 ABCB7O75027 752 aa12.8□□□□□ -0.36
SUB1-203ENST00000502897 POLA2Q14181 598 aa12.73□□□□□ -0.37
SUB1-203ENST00000502897 DSG3P32926 999 aa12.67□□□□□ -0.38
SUB1-203ENST00000502897 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
SUB1-203ENST00000502897 FBLN2P98095 1184 aa12.45□□□□□ -0.42
SUB1-203ENST00000502897 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
SUB1-203ENST00000502897 FKBP8Q14318 412 aa12.37□□□□□ -0.43
SUB1-203ENST00000502897 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
SUB1-203ENST00000502897 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
SUB1-203ENST00000502897 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
SUB1-203ENST00000502897 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
SUB1-203ENST00000502897 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
SUB1-203ENST00000502897 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
SUB1-203ENST00000502897 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
SUB1-203ENST00000502897 RBM42Q9BTD8 480 aaKnown RBP12□□□□□ -0.49
SUB1-203ENST00000502897 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
SUB1-203ENST00000502897 PROM2Q8N271 834 aa11.92□□□□□ -0.5
SUB1-203ENST00000502897 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
SUB1-203ENST00000502897 REM2Q8IYK8 340 aaPredicted RBP11.84□□□□□ -0.51
SUB1-203ENST00000502897 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
SUB1-203ENST00000502897 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
SUB1-203ENST00000502897 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
SUB1-203ENST00000502897 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
SUB1-203ENST00000502897 STAG3Q9UJ98 1225 aa11.71□□□□□ -0.53
SUB1-203ENST00000502897 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
SUB1-203ENST00000502897 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
SUB1-203ENST00000502897 MIER1Q8N108 512 aa11.65□□□□□ -0.54
SUB1-203ENST00000502897 PLCD3Q8N3E9 789 aa11.62□□□□□ -0.55
SUB1-203ENST00000502897 IFNLR1Q8IU57 520 aaPredicted RBP11.56□□□□□ -0.56
SUB1-203ENST00000502897 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
SUB1-203ENST00000502897 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
SUB1-203ENST00000502897 CHADLQ6NUI6 762 aa11.53□□□□□ -0.56
SUB1-203ENST00000502897 CREBZFQ9NS37 354 aa11.5□□□□□ -0.57
SUB1-203ENST00000502897 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
SUB1-203ENST00000502897 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
SUB1-203ENST00000502897 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
SUB1-203ENST00000502897 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
SUB1-203ENST00000502897 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
SUB1-203ENST00000502897 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
SUB1-203ENST00000502897 MNX1P50219 401 aaPredicted RBP11.36□□□□□ -0.59
SUB1-203ENST00000502897 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
SUB1-203ENST00000502897 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
SUB1-203ENST00000502897 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
SUB1-203ENST00000502897 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
SUB1-203ENST00000502897 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
SUB1-203ENST00000502897 NUBP1P53384 320 aa11.27□□□□□ -0.61
SUB1-203ENST00000502897 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
SUB1-203ENST00000502897 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
SUB1-203ENST00000502897 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
SUB1-203ENST00000502897 PKD2Q13563 968 aa11.19□□□□□ -0.62
SUB1-203ENST00000502897 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
SUB1-203ENST00000502897 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
SUB1-203ENST00000502897 GSE1Q14687 1217 aa11.13□□□□□ -0.63
SUB1-203ENST00000502897 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
SUB1-203ENST00000502897 POTEHQ6S545 545 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms