RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-208ENST00000504813 NISCHQ9Y2I1 1504 aa36.31■■■■□ 3.4
CNBP-208ENST00000504813 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
CNBP-208ENST00000504813 ABCC9O60706 1549 aa31.95■■■□□ 2.71
CNBP-208ENST00000504813 RB1CC1Q8TDY2 1594 aa30.64■■■□□ 2.5
CNBP-208ENST00000504813 NACADO15069 1562 aa30.54■■■□□ 2.48
CNBP-208ENST00000504813 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
CNBP-208ENST00000504813 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
CNBP-208ENST00000504813 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
CNBP-208ENST00000504813 UNC13AQ9UPW8 1703 aa30.06■■■□□ 2.4
CNBP-208ENST00000504813 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
CNBP-208ENST00000504813 PABPN1Q86U42 306 aaKnown RBP eCLIP29.78■■■□□ 2.36
CNBP-208ENST00000504813 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
CNBP-208ENST00000504813 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
CNBP-208ENST00000504813 SCRIBQ14160 1630 aa29.55■■■□□ 2.32
CNBP-208ENST00000504813 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
CNBP-208ENST00000504813 EIF4G1Q04637 1599 aaKnown RBP28.97■■■□□ 2.23
CNBP-208ENST00000504813 CC2D2AQ9P2K1 1620 aa28.94■■■□□ 2.22
CNBP-208ENST00000504813 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
CNBP-208ENST00000504813 SMARCA4P51532 1647 aa28.26■■■□□ 2.11
CNBP-208ENST00000504813 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
CNBP-208ENST00000504813 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
CNBP-208ENST00000504813 ATAD2BQ9ULI0 1458 aa28.14■■■□□ 2.1
CNBP-208ENST00000504813 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
CNBP-208ENST00000504813 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
CNBP-208ENST00000504813 PEG3Q9GZU2 1588 aa27.99■■■□□ 2.07
CNBP-208ENST00000504813 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
CNBP-208ENST00000504813 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
CNBP-208ENST00000504813 WIZO95785 1651 aa27.7■■■□□ 2.03
CNBP-208ENST00000504813 NESP48681 1621 aa27.59■■■□□ 2.01
CNBP-208ENST00000504813 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
CNBP-208ENST00000504813 ERCC6Q03468 1493 aa27.53■■■□□ 2
CNBP-208ENST00000504813 LAMC3Q9Y6N6 1575 aa27.5■■□□□ 1.99
CNBP-208ENST00000504813 CUX2O14529 1486 aa27.38■■□□□ 1.97
CNBP-208ENST00000504813 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
CNBP-208ENST00000504813 KIF21AQ7Z4S6 1674 aa27.32■■□□□ 1.96
CNBP-208ENST00000504813 CADPSQ9ULU8 1353 aa27.31■■□□□ 1.96
CNBP-208ENST00000504813 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
CNBP-208ENST00000504813 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
CNBP-208ENST00000504813 CFTRP13569 1480 aa27.12■■□□□ 1.93
CNBP-208ENST00000504813 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
CNBP-208ENST00000504813 MRC2Q9UBG0 1479 aa27.02■■□□□ 1.92
CNBP-208ENST00000504813 FANCD2Q9BXW9 1451 aa27.01■■□□□ 1.91
CNBP-208ENST00000504813 CEP164Q9UPV0 1460 aa27■■□□□ 1.91
CNBP-208ENST00000504813 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
CNBP-208ENST00000504813 WDR62O43379 1518 aa26.97■■□□□ 1.91
CNBP-208ENST00000504813 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
CNBP-208ENST00000504813 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
CNBP-208ENST00000504813 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
CNBP-208ENST00000504813 TOPBP1Q92547 1522 aa26.56■■□□□ 1.84
CNBP-208ENST00000504813 ABCC8Q09428 1581 aa26.52■■□□□ 1.84
CNBP-208ENST00000504813 DNMBPQ6XZF7 1577 aa26.52■■□□□ 1.84
CNBP-208ENST00000504813 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
CNBP-208ENST00000504813 ZNF608Q9ULD9 1512 aaPredicted RBP26.37■■□□□ 1.81
CNBP-208ENST00000504813 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
CNBP-208ENST00000504813 POLA1P09884 1462 aaPredicted RBP26.31■■□□□ 1.8
CNBP-208ENST00000504813 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
CNBP-208ENST00000504813 CUX1P39880 1505 aa26.28■■□□□ 1.8
CNBP-208ENST00000504813 FGD5Q6ZNL6 1462 aa26.21■■□□□ 1.79
CNBP-208ENST00000504813 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
CNBP-208ENST00000504813 SOGA1O94964 1423 aa26.17■■□□□ 1.78
CNBP-208ENST00000504813 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.783e-6■■■□□ 18.6
CNBP-208ENST00000504813 OSCARQ8IYS5 282 aa26.15■■□□□ 1.78
CNBP-208ENST00000504813 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
CNBP-208ENST00000504813 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
CNBP-208ENST00000504813 CHD1O14646 1710 aa26.03■■□□□ 1.76
CNBP-208ENST00000504813 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
CNBP-208ENST00000504813 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
CNBP-208ENST00000504813 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
CNBP-208ENST00000504813 SYNJ1O43426 1573 aa25.96■■□□□ 1.75
CNBP-208ENST00000504813 ABCA10Q8WWZ4 1543 aa25.95■■□□□ 1.74
CNBP-208ENST00000504813 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
CNBP-208ENST00000504813 SNAPC4Q5SXM2 1469 aa25.92■■□□□ 1.74
CNBP-208ENST00000504813 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
CNBP-208ENST00000504813 ABCA5Q8WWZ7 1642 aa25.9■■□□□ 1.74
CNBP-208ENST00000504813 GAPVD1Q14C86 1478 aa25.88■■□□□ 1.73
CNBP-208ENST00000504813 MAGI1Q96QZ7 1491 aaPredicted RBP25.88■■□□□ 1.73
CNBP-208ENST00000504813 FBLN2P98095 1184 aa25.86■■□□□ 1.73
CNBP-208ENST00000504813 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
CNBP-208ENST00000504813 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
CNBP-208ENST00000504813 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
CNBP-208ENST00000504813 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
CNBP-208ENST00000504813 SYNJ2O15056 1496 aa25.79■■□□□ 1.72
CNBP-208ENST00000504813 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
CNBP-208ENST00000504813 CHMP7Q8WUX9 453 aaPredicted RBP25.75■■□□□ 1.71
CNBP-208ENST00000504813 CLASP1Q7Z460 1538 aa25.71■■□□□ 1.71
CNBP-208ENST00000504813 ADAMTS12P58397 1594 aa25.66■■□□□ 1.7
CNBP-208ENST00000504813 ERICH3Q5RHP9 1530 aa25.64■■□□□ 1.7
CNBP-208ENST00000504813 GRIN2AQ12879 1464 aa25.59■■□□□ 1.69
CNBP-208ENST00000504813 FHAD1B1AJZ9 1412 aa25.56■■□□□ 1.68
CNBP-208ENST00000504813 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
CNBP-208ENST00000504813 CEP170Q5SW79 1584 aa25.51■■□□□ 1.67
CNBP-208ENST00000504813 CYB5RLQ6IPT4 315 aa25.51■■□□□ 1.67
CNBP-208ENST00000504813 NUP160Q12769 1436 aa25.49■■□□□ 1.67
CNBP-208ENST00000504813 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
CNBP-208ENST00000504813 SHROOM2Q13796 1616 aa25.38■■□□□ 1.65
CNBP-208ENST00000504813 IGF1RP08069 1367 aa25.37■■□□□ 1.65
CNBP-208ENST00000504813 CUL7Q14999 1698 aa25.37■■□□□ 1.65
CNBP-208ENST00000504813 ERCC6L2Q5T890 1561 aa25.34■■□□□ 1.65
CNBP-208ENST00000504813 RUSC2Q8N2Y8 1516 aa25.3■■□□□ 1.64
CNBP-208ENST00000504813 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms