RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 AEBP2Q6ZN18 517 aaPredicted RBP6.45□□□□□ -1.38
SMARCAD1-201ENST00000354268 CHIC1Q5VXU3 224 aa6.15□□□□□ -1.42
SMARCAD1-201ENST00000354268 PHF23Q9BUL5 403 aaPredicted RBP5.87□□□□□ -1.47
SMARCAD1-201ENST00000354268 SLC24A1O60721 1099 aa5.39□□□□□ -1.55
SMARCAD1-201ENST00000354268 PLPPR3Q6T4P5 718 aa5.36□□□□□ -1.55
SMARCAD1-201ENST00000354268 CSRNP3Q8WYN3 585 aa5.33□□□□□ -1.56
SMARCAD1-201ENST00000354268 KCNA4P22459 653 aa5.24□□□□□ -1.57
SMARCAD1-201ENST00000354268 SENP3Q9H4L4 574 aaPredicted RBP5.21□□□□□ -1.58
SMARCAD1-201ENST00000354268 ZBTB22O15209 634 aa5.2□□□□□ -1.58
SMARCAD1-201ENST00000354268 RTN4Q9NQC3 1192 aaKnown RBP5.12□□□□□ -1.59
SMARCAD1-201ENST00000354268 DNAJC5BQ9UF47 199 aa5.08□□□□□ -1.6
SMARCAD1-201ENST00000354268 FOXD1Q16676 465 aa5.04□□□□□ -1.6
SMARCAD1-201ENST00000354268 POTEDQ86YR6 584 aa5□□□□□ -1.61
SMARCAD1-201ENST00000354268 ADRA2BP18089 450 aa4.98□□□□□ -1.61
SMARCAD1-201ENST00000354268 NCBP3Q53F19 620 aaKnown RBP4.96□□□□□ -1.62
SMARCAD1-201ENST00000354268 EHMT2Q96KQ7 1210 aa4.9□□□□□ -1.62
SMARCAD1-201ENST00000354268 PPP6R1Q9UPN7 881 aa4.85□□□□□ -1.63
SMARCAD1-201ENST00000354268 DNAJC5Q9H3Z4 198 aa4.79□□□□□ -1.64
SMARCAD1-201ENST00000354268 AMER1Q5JTC6 1135 aaPredicted RBP4.78□□□□□ -1.64
SMARCAD1-201ENST00000354268 PRKCSHP14314 528 aaPredicted RBP4.74□□□□□ -1.65
SMARCAD1-201ENST00000354268 TIMELESSQ9UNS1 1208 aa4.72□□□□□ -1.65
SMARCAD1-201ENST00000354268 DAXXQ9UER7 740 aaPredicted RBP4.71□□□□□ -1.66
SMARCAD1-201ENST00000354268 NPM3O75607 178 aaKnown RBP4.71□□□□□ -1.66
SMARCAD1-201ENST00000354268 PROM2Q8N271 834 aa4.66□□□□□ -1.66
SMARCAD1-201ENST00000354268 KDM2AQ9Y2K7 1162 aa4.66□□□□□ -1.66
SMARCAD1-201ENST00000354268 MSH5O43196 834 aa4.64□□□□□ -1.67
SMARCAD1-201ENST00000354268 TAOK2Q9UL54 1235 aa4.6□□□□□ -1.67
SMARCAD1-201ENST00000354268 SLC4A1APQ9BWU0 796 aaKnown RBP4.59□□□□□ -1.67
SMARCAD1-201ENST00000354268 PLCB2Q00722 1185 aa4.56□□□□□ -1.68
SMARCAD1-201ENST00000354268 SLC4A2P04920 1241 aa4.52□□□□□ -1.69
SMARCAD1-201ENST00000354268 ARXQ96QS3 562 aa4.51□□□□□ -1.69
SMARCAD1-201ENST00000354268 APLP2Q06481 763 aa4.5□□□□□ -1.69
SMARCAD1-201ENST00000354268 NPM1P06748 294 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMARCAD1-201ENST00000354268 HRCP23327 699 aa4.46□□□□□ -1.69
SMARCAD1-201ENST00000354268 PKD2Q13563 968 aa4.46□□□□□ -1.7
SMARCAD1-201ENST00000354268 PPP4R3CPQ6ZMV5 832 aa4.45□□□□□ -1.7
SMARCAD1-201ENST00000354268 FBLN2P98095 1184 aa4.44□□□□□ -1.7
SMARCAD1-201ENST00000354268 ATF5Q9Y2D1 282 aaPredicted RBP4.39□□□□□ -1.71
SMARCAD1-201ENST00000354268 TRHP20396 242 aaPredicted RBP4.38□□□□□ -1.71
SMARCAD1-201ENST00000354268 TMEM132AQ24JP5 1023 aa4.36□□□□□ -1.71
SMARCAD1-201ENST00000354268 VSIG10Q8N0Z9 540 aa4.35□□□□□ -1.71
SMARCAD1-201ENST00000354268 KLHL34Q8N239 644 aa4.34□□□□□ -1.71
SMARCAD1-201ENST00000354268 FOXD4L1Q9NU39 408 aa4.34□□□□□ -1.71
SMARCAD1-201ENST00000354268 PIAS4Q8N2W9 510 aaPredicted RBP4.32□□□□□ -1.72
SMARCAD1-201ENST00000354268 IFNLR1Q8IU57 520 aaPredicted RBP4.3□□□□□ -1.72
SMARCAD1-201ENST00000354268 ATXN8OSP0DMR3 200 aa4.3□□□□□ -1.72
SMARCAD1-201ENST00000354268 DMRT2Q9Y5R5 561 aa4.3□□□□□ -1.72
SMARCAD1-201ENST00000354268 MAPK8IP2Q13387 824 aaPredicted RBP4.29□□□□□ -1.72
SMARCAD1-201ENST00000354268 TULP1O00294 542 aaPredicted RBP4.27□□□□□ -1.73
SMARCAD1-201ENST00000354268 LOC105371045A0A1W2PR82 267 aa4.27□□□□□ -1.73
SMARCAD1-201ENST00000354268 C1orf115Q9H7X2 142 aa4.26□□□□□ -1.73
SMARCAD1-201ENST00000354268 GTF3C3Q9Y5Q9 886 aa4.26□□□□□ -1.73
SMARCAD1-201ENST00000354268 TPRNQ4KMQ1 711 aa4.25□□□□□ -1.73
SMARCAD1-201ENST00000354268 BCANQ96GW7 911 aa4.25□□□□□ -1.73
SMARCAD1-201ENST00000354268 MKRN4PQ13434 485 aaPredicted RBP4.23□□□□□ -1.73
SMARCAD1-201ENST00000354268 FKBP8Q14318 412 aa4.19□□□□□ -1.74
SMARCAD1-201ENST00000354268 HOXD11P31277 338 aaPredicted RBP4.19□□□□□ -1.74
SMARCAD1-201ENST00000354268 CNKSR2Q8WXI2 1034 aa4.19□□□□□ -1.74
SMARCAD1-201ENST00000354268 TRIM26Q12899 539 aaPredicted RBP4.19□□□□□ -1.74
SMARCAD1-201ENST00000354268 DCAF8L2P0C7V8 631 aa4.18□□□□□ -1.74
SMARCAD1-201ENST00000354268 FAM9AQ8IZU1 332 aaPredicted RBP4.18□□□□□ -1.74
SMARCAD1-201ENST00000354268 DCAF8L1A6NGE4 600 aa4.17□□□□□ -1.74
SMARCAD1-201ENST00000354268 NKX1-1Q15270 411 aaPredicted RBP4.16□□□□□ -1.74
SMARCAD1-201ENST00000354268 IGSF5Q9NSI5 407 aa4.16□□□□□ -1.74
SMARCAD1-201ENST00000354268 ONECUT3O60422 494 aaPredicted RBP4.15□□□□□ -1.74
SMARCAD1-201ENST00000354268 RNF39Q9H2S5 420 aa4.15□□□□□ -1.75
SMARCAD1-201ENST00000354268 UBTFP17480 764 aaKnown RBP4.15□□□□□ -1.75
SMARCAD1-201ENST00000354268 NECTIN2Q92692 538 aa4.14□□□□□ -1.75
SMARCAD1-201ENST00000354268 RNF216Q9NWF9 866 aaPredicted RBP4.13□□□□□ -1.75
SMARCAD1-201ENST00000354268 BRPF1P55201 1214 aaPredicted RBP4.12□□□□□ -1.75
SMARCAD1-201ENST00000354268 TSHZ2Q9NRE2 1034 aa4.11□□□□□ -1.75
SMARCAD1-201ENST00000354268 BBXQ8WY36 941 aaPredicted RBP4.11□□□□□ -1.75
SMARCAD1-201ENST00000354268 RNF25Q96BH1 459 aaPredicted RBP4.09□□□□□ -1.76
SMARCAD1-201ENST00000354268 HOMEZQ8IX15 550 aa4.08□□□□□ -1.76
SMARCAD1-201ENST00000354268 RGS22Q8NE09 1264 aa4.08□□□□□ -1.76
SMARCAD1-201ENST00000354268 IGSF3O75054 1194 aa4.05□□□□□ -1.76
SMARCAD1-201ENST00000354268 RGL2O15211 777 aa4.04□□□□□ -1.76
SMARCAD1-201ENST00000354268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMARCAD1-201ENST00000354268 GTPBP6O43824 516 aaPredicted RBP4.01□□□□□ -1.77
SMARCAD1-201ENST00000354268 VASPP50552 380 aaPredicted RBP3.98□□□□□ -1.77
SMARCAD1-201ENST00000354268 HAP1P54257 671 aaPredicted RBP3.98□□□□□ -1.77
SMARCAD1-201ENST00000354268 MYCNP04198 464 aaPredicted RBP3.96□□□□□ -1.78
SMARCAD1-201ENST00000354268 FNBP4Q8N3X1 1017 aaPredicted RBP3.96□□□□□ -1.78
SMARCAD1-201ENST00000354268 GPR37O15354 613 aa3.96□□□□□ -1.78
SMARCAD1-201ENST00000354268 CADPS2Q86UW7 1296 aa3.95□□□□□ -1.78
SMARCAD1-201ENST00000354268 ZMYND10O75800 440 aa3.94□□□□□ -1.78
SMARCAD1-201ENST00000354268 HS6ST3Q8IZP7 471 aa3.92□□□□□ -1.78
SMARCAD1-201ENST00000354268 NOM1Q5C9Z4 860 aaKnown RBP3.92□□□□□ -1.78
SMARCAD1-201ENST00000354268 C1QBPQ07021 282 aaKnown RBP3.91□□□□□ -1.78
SMARCAD1-201ENST00000354268 SAMD1Q6SPF0 538 aaPredicted RBP3.9□□□□□ -1.79
SMARCAD1-201ENST00000354268 FBXO31Q5XUX0 539 aaPredicted RBP3.9□□□□□ -1.79
SMARCAD1-201ENST00000354268 MNX1P50219 401 aaPredicted RBP3.89□□□□□ -1.79
SMARCAD1-201ENST00000354268 PODXL2Q9NZ53 605 aa3.89□□□□□ -1.79
SMARCAD1-201ENST00000354268 FBXO3Q9UK99 471 aa3.89□□□□□ -1.79
SMARCAD1-201ENST00000354268 SRPK2P78362 688 aaKnown RBP3.89□□□□□ -1.79
SMARCAD1-201ENST00000354268 ARIH1Q9Y4X5 557 aaPredicted RBP3.89□□□□□ -1.79
SMARCAD1-201ENST00000354268 SGIP1Q9BQI5 828 aa3.88□□□□□ -1.79
SMARCAD1-201ENST00000354268 CADPSQ9ULU8 1353 aa3.88□□□□□ -1.79
SMARCAD1-201ENST00000354268 PLEKHG3A1L390 1219 aa3.88□□□□□ -1.79
SMARCAD1-201ENST00000354268 U3KPZ7 1027 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms