RNA–Protein interactions for RNA: ENST00000614176.4

FOXP1-220, Transcript of forkhead box P1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FOXP1, Length 6,384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-220ENST00000614176 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.69
FOXP1-220ENST00000614176 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
FOXP1-220ENST00000614176 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
FOXP1-220ENST00000614176 ABCC9O60706 1549 aa16.7■□□□□ 0.26
FOXP1-220ENST00000614176 RB1CC1Q8TDY2 1594 aa16.16■□□□□ 0.18
FOXP1-220ENST00000614176 NACADO15069 1562 aa16.11■□□□□ 0.17
FOXP1-220ENST00000614176 SHROOM4Q9ULL8 1493 aa16.07■□□□□ 0.16
FOXP1-220ENST00000614176 ZCCHC6Q5VYS8 1495 aaKnown RBP16.06■□□□□ 0.16
FOXP1-220ENST00000614176 DCAF1Q9Y4B6 1507 aa15.92■□□□□ 0.14
FOXP1-220ENST00000614176 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
FOXP1-220ENST00000614176 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
FOXP1-220ENST00000614176 SUPT5HO00267 1087 aaKnown RBP15.67■□□□□ 0.1
FOXP1-220ENST00000614176 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
FOXP1-220ENST00000614176 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
FOXP1-220ENST00000614176 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
FOXP1-220ENST00000614176 SMARCA2P51531 1590 aa15.08■□□□□ 0
FOXP1-220ENST00000614176 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
FOXP1-220ENST00000614176 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
FOXP1-220ENST00000614176 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
FOXP1-220ENST00000614176 RSF1Q96T23 1441 aaPredicted RBP14.91□□□□□ -0.02
FOXP1-220ENST00000614176 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
FOXP1-220ENST00000614176 TRIM41Q8WV44 630 aa14.88□□□□□ -0.03
FOXP1-220ENST00000614176 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
FOXP1-220ENST00000614176 SMARCA4P51532 1647 aa14.84□□□□□ -0.03
FOXP1-220ENST00000614176 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
FOXP1-220ENST00000614176 NCAPD3P42695 1498 aa14.81□□□□□ -0.04
FOXP1-220ENST00000614176 PDS5BQ9NTI5 1447 aa14.78□□□□□ -0.04
FOXP1-220ENST00000614176 MROH2BQ7Z745 1585 aa14.78□□□□□ -0.04
FOXP1-220ENST00000614176 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
FOXP1-220ENST00000614176 UNC13AQ9UPW8 1703 aa14.74□□□□□ -0.05
FOXP1-220ENST00000614176 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
FOXP1-220ENST00000614176 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
FOXP1-220ENST00000614176 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
FOXP1-220ENST00000614176 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
FOXP1-220ENST00000614176 APLP2Q06481 763 aa14.54□□□□□ -0.08
FOXP1-220ENST00000614176 WIZO95785 1651 aa14.53□□□□□ -0.08
FOXP1-220ENST00000614176 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
FOXP1-220ENST00000614176 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
FOXP1-220ENST00000614176 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
FOXP1-220ENST00000614176 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
FOXP1-220ENST00000614176 FBLN2P98095 1184 aa14.49□□□□□ -0.09
FOXP1-220ENST00000614176 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
FOXP1-220ENST00000614176 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
FOXP1-220ENST00000614176 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
FOXP1-220ENST00000614176 HRCP23327 699 aa14.39□□□□□ -0.11
FOXP1-220ENST00000614176 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
FOXP1-220ENST00000614176 CHMP7Q8WUX9 453 aaPredicted RBP14.38□□□□□ -0.11
FOXP1-220ENST00000614176 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
FOXP1-220ENST00000614176 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
FOXP1-220ENST00000614176 CFTRP13569 1480 aa14.34□□□□□ -0.11
FOXP1-220ENST00000614176 PCGF6Q9BYE7 350 aa14.33□□□□□ -0.11
FOXP1-220ENST00000614176 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
FOXP1-220ENST00000614176 KIF27Q86VH2 1401 aa14.29□□□□□ -0.12
FOXP1-220ENST00000614176 EEA1Q15075 1411 aa14.28□□□□□ -0.12
FOXP1-220ENST00000614176 RANGAP1P46060 587 aaPredicted RBP14.28□□□□□ -0.12
FOXP1-220ENST00000614176 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
FOXP1-220ENST00000614176 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
FOXP1-220ENST00000614176 SOGA1O94964 1423 aa14.27□□□□□ -0.13
FOXP1-220ENST00000614176 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
FOXP1-220ENST00000614176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
FOXP1-220ENST00000614176 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
FOXP1-220ENST00000614176 NESP48681 1621 aa14.2□□□□□ -0.14
FOXP1-220ENST00000614176 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
FOXP1-220ENST00000614176 IFT140Q96RY7 1462 aa14.16□□□□□ -0.14
FOXP1-220ENST00000614176 CUX2O14529 1486 aa14.16□□□□□ -0.14
FOXP1-220ENST00000614176 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
FOXP1-220ENST00000614176 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.15
FOXP1-220ENST00000614176 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
FOXP1-220ENST00000614176 DNMBPQ6XZF7 1577 aa14.08□□□□□ -0.16
FOXP1-220ENST00000614176 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
FOXP1-220ENST00000614176 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
FOXP1-220ENST00000614176 FGD5Q6ZNL6 1462 aa14.05□□□□□ -0.16
FOXP1-220ENST00000614176 CARMIL1Q5VZK9 1371 aa14.04□□□□□ -0.16
FOXP1-220ENST00000614176 TRIM26Q12899 539 aaPredicted RBP14.02□□□□□ -0.17
FOXP1-220ENST00000614176 GRIN2BQ13224 1484 aa14□□□□□ -0.17
FOXP1-220ENST00000614176 GAPVD1Q14C86 1478 aa14□□□□□ -0.17
FOXP1-220ENST00000614176 CARMIL2Q6F5E8 1435 aa14□□□□□ -0.17
FOXP1-220ENST00000614176 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
FOXP1-220ENST00000614176 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
FOXP1-220ENST00000614176 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
FOXP1-220ENST00000614176 PELP1Q8IZL8 1130 aaKnown RBP13.93□□□□□ -0.18
FOXP1-220ENST00000614176 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
FOXP1-220ENST00000614176 FHAD1B1AJZ9 1412 aa13.91□□□□□ -0.18
FOXP1-220ENST00000614176 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
FOXP1-220ENST00000614176 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
FOXP1-220ENST00000614176 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
FOXP1-220ENST00000614176 RAPGEF2Q9Y4G8 1499 aa13.89□□□□□ -0.19
FOXP1-220ENST00000614176 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
FOXP1-220ENST00000614176 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■■■ 26.9
FOXP1-220ENST00000614176 WDR62O43379 1518 aa13.88□□□□□ -0.19
FOXP1-220ENST00000614176 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
FOXP1-220ENST00000614176 CUX1P39880 1505 aa13.86□□□□□ -0.19
FOXP1-220ENST00000614176 ABCA10Q8WWZ4 1543 aa13.86□□□□□ -0.19
FOXP1-220ENST00000614176 MAGI1Q96QZ7 1491 aaPredicted RBP13.84□□□□□ -0.19
FOXP1-220ENST00000614176 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
FOXP1-220ENST00000614176 PLEKHD1A6NEE1 506 aa13.8□□□□□ -0.2
FOXP1-220ENST00000614176 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
FOXP1-220ENST00000614176 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
FOXP1-220ENST00000614176 IGF1RP08069 1367 aa13.78□□□□□ -0.2
FOXP1-220ENST00000614176 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms