RNA–Protein interactions for RNA: ENST00000246548.8

UBA2-201, Transcript of ubiquitin like modifier activating enzyme 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA2, Length 4,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA2-201ENST00000246548 NISCHQ9Y2I1 1504 aa31.41■■■□□ 2.62
UBA2-201ENST00000246548 CCDC180Q9P1Z9 1646 aa27.43■■□□□ 1.98
UBA2-201ENST00000246548 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
UBA2-201ENST00000246548 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
UBA2-201ENST00000246548 MYO15BQ96JP2 1530 aa25.74■■□□□ 1.71
UBA2-201ENST00000246548 SHROOM4Q9ULL8 1493 aa25.28■■□□□ 1.64
UBA2-201ENST00000246548 NACADO15069 1562 aa25.24■■□□□ 1.63
UBA2-201ENST00000246548 ABCC9O60706 1549 aa25.02■■□□□ 1.6
UBA2-201ENST00000246548 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
UBA2-201ENST00000246548 UNC13AQ9UPW8 1703 aa24.85■■□□□ 1.57
UBA2-201ENST00000246548 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
UBA2-201ENST00000246548 DCAF8L2P0C7V8 631 aa24.79■■□□□ 1.56
UBA2-201ENST00000246548 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
UBA2-201ENST00000246548 BICRAQ9NZM4 1560 aa24.41■■□□□ 1.5
UBA2-201ENST00000246548 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
UBA2-201ENST00000246548 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
UBA2-201ENST00000246548 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
UBA2-201ENST00000246548 WIZO95785 1651 aa24.15■■□□□ 1.46
UBA2-201ENST00000246548 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
UBA2-201ENST00000246548 SMARCA4P51532 1647 aa24.12■■□□□ 1.45
UBA2-201ENST00000246548 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
UBA2-201ENST00000246548 PEG3Q9GZU2 1588 aa24.02■■□□□ 1.44
UBA2-201ENST00000246548 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
UBA2-201ENST00000246548 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
UBA2-201ENST00000246548 SMARCA2P51531 1590 aa23.73■■□□□ 1.39
UBA2-201ENST00000246548 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
UBA2-201ENST00000246548 ATAD2BQ9ULI0 1458 aa23.5■■□□□ 1.35
UBA2-201ENST00000246548 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
UBA2-201ENST00000246548 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
UBA2-201ENST00000246548 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
UBA2-201ENST00000246548 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
UBA2-201ENST00000246548 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
UBA2-201ENST00000246548 PRDM2Q13029 1718 aa23.14■■□□□ 1.29
UBA2-201ENST00000246548 SYNJ1O43426 1573 aa23■■□□□ 1.27
UBA2-201ENST00000246548 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
UBA2-201ENST00000246548 CC2D2AQ9P2K1 1620 aa22.96■■□□□ 1.27
UBA2-201ENST00000246548 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
UBA2-201ENST00000246548 TOP2BQ02880 1626 aa22.9■■□□□ 1.26
UBA2-201ENST00000246548 CFTRP13569 1480 aa22.87■■□□□ 1.25
UBA2-201ENST00000246548 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
UBA2-201ENST00000246548 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.244e-7■□□□□ 9.1
UBA2-201ENST00000246548 SOGA1O94964 1423 aa22.71■■□□□ 1.23
UBA2-201ENST00000246548 EEA1Q15075 1411 aa22.71■■□□□ 1.23
UBA2-201ENST00000246548 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
UBA2-201ENST00000246548 CUX1P39880 1505 aa22.68■■□□□ 1.22
UBA2-201ENST00000246548 KIF21BO75037 1637 aa22.67■■□□□ 1.22
UBA2-201ENST00000246548 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
UBA2-201ENST00000246548 LAMC3Q9Y6N6 1575 aa22.44■■□□□ 1.18
UBA2-201ENST00000246548 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
UBA2-201ENST00000246548 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
UBA2-201ENST00000246548 ERICH3Q5RHP9 1530 aa22.4■■□□□ 1.18
UBA2-201ENST00000246548 GOLGA3Q08378 1498 aa22.38■■□□□ 1.17
UBA2-201ENST00000246548 PRXQ9BXM0 1461 aa22.38■■□□□ 1.17
UBA2-201ENST00000246548 CEP164Q9UPV0 1460 aa22.36■■□□□ 1.17
UBA2-201ENST00000246548 FAM9AQ8IZU1 332 aaPredicted RBP22.35■■□□□ 1.17
UBA2-201ENST00000246548 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.16
UBA2-201ENST00000246548 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
UBA2-201ENST00000246548 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
UBA2-201ENST00000246548 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
UBA2-201ENST00000246548 NESP48681 1621 aa22.27■■□□□ 1.16
UBA2-201ENST00000246548 RAPGEF2Q9Y4G8 1499 aa22.26■■□□□ 1.15
UBA2-201ENST00000246548 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
UBA2-201ENST00000246548 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
UBA2-201ENST00000246548 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
UBA2-201ENST00000246548 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
UBA2-201ENST00000246548 ABCA10Q8WWZ4 1543 aa22.15■■□□□ 1.14
UBA2-201ENST00000246548 ABCA5Q8WWZ7 1642 aa22.12■■□□□ 1.13
UBA2-201ENST00000246548 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
UBA2-201ENST00000246548 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
UBA2-201ENST00000246548 POLA1P09884 1462 aaPredicted RBP22.11■■□□□ 1.13
UBA2-201ENST00000246548 TARBP1Q13395 1621 aaKnown RBP22.08■■□□□ 1.13
UBA2-201ENST00000246548 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
UBA2-201ENST00000246548 IGF1RP08069 1367 aa22.03■■□□□ 1.12
UBA2-201ENST00000246548 CUL7Q14999 1698 aa22.02■■□□□ 1.12
UBA2-201ENST00000246548 PCGF6Q9BYE7 350 aa22■■□□□ 1.11
UBA2-201ENST00000246548 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
UBA2-201ENST00000246548 CUX2O14529 1486 aa21.98■■□□□ 1.11
UBA2-201ENST00000246548 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
UBA2-201ENST00000246548 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
UBA2-201ENST00000246548 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
UBA2-201ENST00000246548 CLIP1P30622 1438 aa21.93■■□□□ 1.1
UBA2-201ENST00000246548 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
UBA2-201ENST00000246548 HRCP23327 699 aa21.92■■□□□ 1.1
UBA2-201ENST00000246548 WDR62O43379 1518 aa21.89■■□□□ 1.1
UBA2-201ENST00000246548 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
UBA2-201ENST00000246548 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
UBA2-201ENST00000246548 ARHGAP35Q9NRY4 1499 aa21.86■■□□□ 1.09
UBA2-201ENST00000246548 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
UBA2-201ENST00000246548 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
UBA2-201ENST00000246548 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
UBA2-201ENST00000246548 SAMD9Q5K651 1589 aa21.75■■□□□ 1.07
UBA2-201ENST00000246548 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
UBA2-201ENST00000246548 MAP3K1Q13233 1512 aa21.73■■□□□ 1.07
UBA2-201ENST00000246548 CFAP43Q8NDM7 1665 aa21.71■■□□□ 1.07
UBA2-201ENST00000246548 ADAMTS12P58397 1594 aa21.69■■□□□ 1.06
UBA2-201ENST00000246548 EFCAB5A4FU69 1503 aa21.68■■□□□ 1.06
UBA2-201ENST00000246548 LRRIQ1Q96JM4 1722 aa21.68■■□□□ 1.06
UBA2-201ENST00000246548 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
UBA2-201ENST00000246548 TIAM1Q13009 1591 aa21.58■■□□□ 1.05
UBA2-201ENST00000246548 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.042e-7■■■■■ 32.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms