Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 LINC00565-201ENST00000562710 2331 ntBASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SAA2-SAA4A0A096LPE2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SAA2-SAA4A0A096LPE2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SAA2-SAA4A0A096LPE2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.89■□□□□ 0.45
SAA2-SAA4A0A096LPE2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.89■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.89■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SAA2-SAA4A0A096LPE2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SAA2-SAA4A0A096LPE2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
SAA2-SAA4A0A096LPE2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SRD5A1P1-201ENST00000442297 786 ntBASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 AC092053.2-201ENST00000640557 1818 ntBASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SAA2-SAA4A0A096LPE2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 AL512631.2-201ENST00000604634 923 ntBASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 pRNA.6-201ENST00000610482 90 ntBASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 pRNA.5-201ENST00000612139 90 ntBASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 pRNA.11-201ENST00000618423 90 ntBASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 pRNA.13-201ENST00000619112 90 ntBASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SAA2-SAA4A0A096LPE2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 AC133637.1-201ENST00000624115 1537 ntBASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.86■□□□□ 0.45
SAA2-SAA4A0A096LPE2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SAA2-SAA4A0A096LPE2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms