Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 GUSBP5-202ENST00000510805 1989 ntBASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PCDHGC3Q9UN70 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 CA15P2-201ENST00000611168 834 ntBASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGC3Q9UN70 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHGC3Q9UN70 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGC3Q9UN70 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGC3Q9UN70 UNC93B3-201ENST00000308076 687 ntBASIC23.26■■□□□ 1.31
PCDHGC3Q9UN70 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGC3Q9UN70 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHGC3Q9UN70 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHGC3Q9UN70 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGC3Q9UN70 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGC3Q9UN70 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGC3Q9UN70 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 ECEL1P1-201ENST00000373592 1742 ntBASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 AC242852.2-201ENST00000615738 1807 ntBASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHGC3Q9UN70 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 AC010525.1-201ENST00000585559 441 ntBASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGC3Q9UN70 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 AC068587.7-201ENST00000641602 218 ntBASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 AC137767.1-201ENST00000602918 1920 ntBASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PCDHGC3Q9UN70 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms