Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AP006261.1-201ENST00000584783 668 ntBASIC20.92■□□□□ 0.94
VCX3BQ9H321 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCX3BQ9H321 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.92■□□□□ 0.94
VCX3BQ9H321 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCX3BQ9H321 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.92■□□□□ 0.94
VCX3BQ9H321 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
VCX3BQ9H321 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCX3BQ9H321 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCX3BQ9H321 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
VCX3BQ9H321 AF106564.1-201ENST00000607058 2553 ntBASIC20.92■□□□□ 0.94
VCX3BQ9H321 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCX3BQ9H321 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCX3BQ9H321 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VCX3BQ9H321 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCX3BQ9H321 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCX3BQ9H321 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
VCX3BQ9H321 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.91■□□□□ 0.94
VCX3BQ9H321 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCX3BQ9H321 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCX3BQ9H321 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.91■□□□□ 0.94
VCX3BQ9H321 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VCX3BQ9H321 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCX3BQ9H321 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCX3BQ9H321 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.9■□□□□ 0.94
VCX3BQ9H321 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCX3BQ9H321 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCX3BQ9H321 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCX3BQ9H321 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCX3BQ9H321 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.9■□□□□ 0.94
VCX3BQ9H321 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VCX3BQ9H321 AC007952.6-201ENST00000573168 2673 ntBASIC20.9■□□□□ 0.94
VCX3BQ9H321 AC003957.1-201ENST00000625108 2673 ntBASIC20.9■□□□□ 0.94
VCX3BQ9H321 LINC01971-201ENST00000617888 1048 ntBASIC20.9■□□□□ 0.94
VCX3BQ9H321 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.9■□□□□ 0.94
VCX3BQ9H321 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
VCX3BQ9H321 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCX3BQ9H321 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VCX3BQ9H321 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
VCX3BQ9H321 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VCX3BQ9H321 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VCX3BQ9H321 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VCX3BQ9H321 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VCX3BQ9H321 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.89■□□□□ 0.93
VCX3BQ9H321 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.89■□□□□ 0.93
VCX3BQ9H321 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
VCX3BQ9H321 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VCX3BQ9H321 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3BQ9H321 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VCX3BQ9H321 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
VCX3BQ9H321 AL022069.1-201ENST00000568025 1636 ntBASIC20.87■□□□□ 0.93
VCX3BQ9H321 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.87■□□□□ 0.93
VCX3BQ9H321 AC025884.2-201ENST00000553429 711 ntBASIC20.87■□□□□ 0.93
VCX3BQ9H321 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
VCX3BQ9H321 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
VCX3BQ9H321 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VCX3BQ9H321 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.87■□□□□ 0.93
VCX3BQ9H321 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.86■□□□□ 0.93
VCX3BQ9H321 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.86■□□□□ 0.93
VCX3BQ9H321 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VCX3BQ9H321 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VCX3BQ9H321 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.86■□□□□ 0.93
VCX3BQ9H321 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.86■□□□□ 0.93
VCX3BQ9H321 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VCX3BQ9H321 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.86■□□□□ 0.93
VCX3BQ9H321 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.85■□□□□ 0.93
VCX3BQ9H321 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
VCX3BQ9H321 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.85■□□□□ 0.93
VCX3BQ9H321 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.85■□□□□ 0.93
VCX3BQ9H321 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VCX3BQ9H321 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms