Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.36■□□□□ 0.694e-7■■□□□ 12.2
FUBP3Q96I24 PAFAH1B2-203ENST00000526888 1099 ntTSL 216.6■□□□□ 0.254e-7■■□□□ 12.2
FUBP3Q96I24 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.514e-7■■□□□ 12.2
FUBP3Q96I24 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.91□□□□□ -1.464e-7■■□□□ 12.2
FUBP3Q96I24 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.535e-6■■□□□ 12.2
FUBP3Q96I24 DPY30-204ENST00000422413 601 ntTSL 318.34■□□□□ 0.535e-6■■□□□ 12.2
FUBP3Q96I24 DPY30-205ENST00000430665 524 ntTSL 514□□□□□ -0.175e-6■■□□□ 12.2
FUBP3Q96I24 DPY30-203ENST00000414013 523 ntTSL 313.78□□□□□ -0.25e-6■■□□□ 12.2
FUBP3Q96I24 DPY30-207ENST00000452582 637 ntTSL 311.8□□□□□ -0.525e-6■■□□□ 12.2
FUBP3Q96I24 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.331e-6■■□□□ 12.2
FUBP3Q96I24 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.841e-10■■□□□ 12.2
FUBP3Q96I24 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.45■□□□□ 0.71e-10■■□□□ 12.2
FUBP3Q96I24 CALM2-203ENST00000432899 1004 ntTSL 514.45□□□□□ -0.11e-10■■□□□ 12.2
FUBP3Q96I24 STPG4-206ENST00000422269 983 ntTSL 211.6□□□□□ -0.551e-10■■□□□ 12.2
FUBP3Q96I24 CALM2-205ENST00000460218 4502 ntTSL 1 (best)1.94□□□□□ -2.11e-10■■□□□ 12.2
FUBP3Q96I24 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.851e-7■■□□□ 12.2
FUBP3Q96I24 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.821e-7■■□□□ 12.2
FUBP3Q96I24 FN3KRP-207ENST00000574832 1422 ntTSL 220.16■□□□□ 0.821e-7■■□□□ 12.2
FUBP3Q96I24 FN3KRP-206ENST00000574356 887 ntTSL 519.76■□□□□ 0.751e-7■■□□□ 12.2
FUBP3Q96I24 FN3KRP-204ENST00000573158 627 ntTSL 317.73■□□□□ 0.431e-7■■□□□ 12.2
FUBP3Q96I24 FN3KRP-205ENST00000574206 683 ntTSL 317.38■□□□□ 0.371e-7■■□□□ 12.2
FUBP3Q96I24 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.261e-7■■□□□ 12.2
FUBP3Q96I24 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.56□□□□□ -0.084e-6■■□□□ 12.2
FUBP3Q96I24 FN3KRP-209ENST00000577128 515 ntTSL 513.25□□□□□ -0.291e-7■■□□□ 12.2
FUBP3Q96I24 BRD1-204ENST00000438393 3051 ntTSL 213.24□□□□□ -0.294e-6■■□□□ 12.2
FUBP3Q96I24 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.34e-6■■□□□ 12.2
FUBP3Q96I24 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.484e-6■■□□□ 12.2
FUBP3Q96I24 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC11.91□□□□□ -0.54e-6■■□□□ 12.2
FUBP3Q96I24 SMAD4-212ENST00000591126 4970 ntTSL 1 (best)6.58□□□□□ -1.361e-7■■□□□ 12.2
FUBP3Q96I24 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.631e-7■■□□□ 12.2
FUBP3Q96I24 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -08e-7■■□□□ 12.2
FUBP3Q96I24 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.812e-7■■□□□ 12.2
FUBP3Q96I24 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.97□□□□□ -0.972e-7■■□□□ 12.2
FUBP3Q96I24 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.32■□□□□ 0.22e-10■■□□□ 12.2
FUBP3Q96I24 CALU-201ENST00000249364 3357 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.382e-10■■□□□ 12.2
FUBP3Q96I24 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC10.35□□□□□ -0.752e-10■■□□□ 12.2
FUBP3Q96I24 CALU-204ENST00000493278 589 ntTSL 35.34□□□□□ -1.552e-10■■□□□ 12.2
FUBP3Q96I24 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.057e-7■■□□□ 12.2
FUBP3Q96I24 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.067e-7■■□□□ 12.2
FUBP3Q96I24 TFRC-205ENST00000426789 354 ntTSL 33.8□□□□□ -1.87e-7■■□□□ 12.2
FUBP3Q96I24 ZCCHC11-215ENST00000494469 827 ntTSL 38.88□□□□□ -0.992e-6■■□□□ 12.1
FUBP3Q96I24 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.022e-6■■□□□ 12.1
FUBP3Q96I24 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.132e-6■■□□□ 12.1
FUBP3Q96I24 ZCCHC11-218ENST00000527941 691 ntTSL 55.72□□□□□ -1.492e-6■■□□□ 12.1
FUBP3Q96I24 ZCCHC11-219ENST00000528457 553 ntTSL 34.98□□□□□ -1.612e-6■■□□□ 12.1
FUBP3Q96I24 ZCCHC11-205ENST00000466440 5763 ntTSL 24.68□□□□□ -1.662e-6■■□□□ 12.1
FUBP3Q96I24 DEK-204ENST00000505224 1372 ntTSL 214.58□□□□□ -0.089e-7■■□□□ 12.1
FUBP3Q96I24 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.199e-7■■□□□ 12.1
FUBP3Q96I24 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.154e-9■■□□□ 12.1
FUBP3Q96I24 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.49□□□□□ -1.214e-9■■□□□ 12.1
FUBP3Q96I24 ARF4-204ENST00000486310 1601 ntTSL 37.42□□□□□ -1.224e-9■■□□□ 12.1
FUBP3Q96I24 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.35□□□□□ -1.554e-9■■□□□ 12.1
FUBP3Q96I24 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.31■■□□□ 1.163e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-209ENST00000502749 790 ntTSL 520.68■□□□□ 0.93e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-216ENST00000510483 719 ntTSL 420.54■□□□□ 0.883e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.223e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-207ENST00000444273 3402 ntTSL 1 (best)14.85□□□□□ -0.033e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.093e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-206ENST00000370711 609 ntTSL 414.2□□□□□ -0.143e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.85□□□□□ -1.153e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-215ENST00000509251 513 ntTSL 46.08□□□□□ -1.443e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-218ENST00000515290 581 ntTSL 45.04□□□□□ -1.63e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-211ENST00000504603 561 ntTSL 54.35□□□□□ -1.713e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-214ENST00000509071 477 ntTSL 53.88□□□□□ -1.793e-6■■□□□ 12.1
FUBP3Q96I24 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.033e-6■■□□□ 12.1
FUBP3Q96I24 PRPF4B-209ENST00000494674 1727 ntTSL 510.96□□□□□ -0.659e-9■■□□□ 12.1
FUBP3Q96I24 PRPF4B-206ENST00000481109 2364 ntTSL 1 (best)10.04□□□□□ -0.89e-9■■□□□ 12.1
FUBP3Q96I24 PRPF4B-203ENST00000463634 2590 ntTSL 58.24□□□□□ -1.099e-9■■□□□ 12.1
FUBP3Q96I24 PRPF4B-208ENST00000490653 581 ntTSL 27.78□□□□□ -1.169e-9■■□□□ 12.1
FUBP3Q96I24 PRPF4B-205ENST00000480058 6775 ntTSL 1 (best)6.12□□□□□ -1.439e-9■■□□□ 12.1
FUBP3Q96I24 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.59e-9■■□□□ 12.1
FUBP3Q96I24 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.321e-9■■□□□ 12.1
FUBP3Q96I24 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.26■□□□□ 0.191e-9■■□□□ 12.1
FUBP3Q96I24 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.9□□□□□ -0.021e-9■■□□□ 12.1
FUBP3Q96I24 RRM2-212ENST00000615152 3434 ntTSL 1 (best) BASIC10.84□□□□□ -0.671e-9■■□□□ 12.1
FUBP3Q96I24 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.831e-9■■□□□ 12.1
FUBP3Q96I24 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.071e-9■■□□□ 12.1
FUBP3Q96I24 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.87□□□□□ -1.151e-9■■□□□ 12.1
FUBP3Q96I24 KPNA2-204ENST00000582898 394 ntTSL 34.92□□□□□ -1.621e-9■■□□□ 12.1
FUBP3Q96I24 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.14■□□□□ 0.179e-12■■□□□ 12.1
FUBP3Q96I24 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.481e-24■■□□□ 12.1
FUBP3Q96I24 PCSK9-202ENST00000490692 3891 ntTSL 210.77□□□□□ -0.681e-24■■□□□ 12.1
FUBP3Q96I24 VGLL4-206ENST00000418000 792 ntTSL 326.85■■□□□ 1.893e-6■■□□□ 12.1
FUBP3Q96I24 PLEKHA1-206ENST00000463663 617 ntTSL 526.3■■□□□ 1.83e-6■■□□□ 12.1
FUBP3Q96I24 VGLL4-205ENST00000417466 894 ntTSL 324.01■■□□□ 1.433e-6■■□□□ 12.1
FUBP3Q96I24 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.426e-8■■□□□ 12.1
FUBP3Q96I24 PLEKHA1-208ENST00000494222 603 ntTSL 321.74■■□□□ 1.073e-6■■□□□ 12.1
FUBP3Q96I24 VGLL4-218ENST00000623028 728 ntTSL 520.04■□□□□ 0.83e-6■■□□□ 12.1
FUBP3Q96I24 VGLL4-204ENST00000417206 581 ntTSL 419.14■□□□□ 0.653e-6■■□□□ 12.1
FUBP3Q96I24 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.09■□□□□ 0.653e-6■■□□□ 12.1
FUBP3Q96I24 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.61■□□□□ 0.573e-6■■□□□ 12.1
FUBP3Q96I24 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.473e-6■■□□□ 12.1
FUBP3Q96I24 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.98■□□□□ 0.313e-6■■□□□ 12.1
FUBP3Q96I24 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.246e-8■■□□□ 12.1
FUBP3Q96I24 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.06■□□□□ 0.162e-6■■□□□ 12.1
FUBP3Q96I24 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.166e-8■■□□□ 12.1
FUBP3Q96I24 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.48■□□□□ 0.076e-8■■□□□ 12.1
FUBP3Q96I24 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.056e-8■■□□□ 12.1
FUBP3Q96I24 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.013e-6■■□□□ 12.1
FUBP3Q96I24 VGLL4-207ENST00000419541 466 ntTSL 314.93□□□□□ -0.023e-6■■□□□ 12.1
Retrieved 100 of 4,568 protein–RNA pairs in 405.9 ms