RNA–Protein interactions for RNA: ENST00000494469.5

ZCCHC11-215, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 3

Gene ZCCHC11, Length 827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-215ENST00000494469 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
ZCCHC11-215ENST00000494469 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.02
ZCCHC11-215ENST00000494469 SENP3Q9H4L4 574 aaPredicted RBP24.6■■□□□ 1.53
ZCCHC11-215ENST00000494469 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
ZCCHC11-215ENST00000494469 FOXD1Q16676 465 aa22.88■■□□□ 1.25
ZCCHC11-215ENST00000494469 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
ZCCHC11-215ENST00000494469 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
ZCCHC11-215ENST00000494469 ADRA2BP18089 450 aa21.55■■□□□ 1.04
ZCCHC11-215ENST00000494469 PIAS4Q8N2W9 510 aaPredicted RBP21.48■■□□□ 1.03
ZCCHC11-215ENST00000494469 MSH5O43196 834 aa21.34■■□□□ 1.01
ZCCHC11-215ENST00000494469 NISCHQ9Y2I1 1504 aa21.02■□□□□ 0.96
ZCCHC11-215ENST00000494469 POTEDQ86YR6 584 aa20.41■□□□□ 0.86
ZCCHC11-215ENST00000494469 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
ZCCHC11-215ENST00000494469 MAPK8IP2Q13387 824 aaPredicted RBP19.72■□□□□ 0.75
ZCCHC11-215ENST00000494469 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
ZCCHC11-215ENST00000494469 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
ZCCHC11-215ENST00000494469 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
ZCCHC11-215ENST00000494469 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
ZCCHC11-215ENST00000494469 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
ZCCHC11-215ENST00000494469 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
ZCCHC11-215ENST00000494469 DCAF8L1A6NGE4 600 aa18.82■□□□□ 0.6
ZCCHC11-215ENST00000494469 ABCC9O60706 1549 aa18.8■□□□□ 0.6
ZCCHC11-215ENST00000494469 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
ZCCHC11-215ENST00000494469 NPM3O75607 178 aaKnown RBP18.54■□□□□ 0.56
ZCCHC11-215ENST00000494469 KCNA4P22459 653 aa18.41■□□□□ 0.54
ZCCHC11-215ENST00000494469 CACNB1Q02641 598 aaPredicted RBP18.21■□□□□ 0.51
ZCCHC11-215ENST00000494469 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
ZCCHC11-215ENST00000494469 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
ZCCHC11-215ENST00000494469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.484e-7■□□□□ 10.2
ZCCHC11-215ENST00000494469 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
ZCCHC11-215ENST00000494469 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
ZCCHC11-215ENST00000494469 NACADO15069 1562 aa17.74■□□□□ 0.43
ZCCHC11-215ENST00000494469 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
ZCCHC11-215ENST00000494469 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
ZCCHC11-215ENST00000494469 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
ZCCHC11-215ENST00000494469 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
ZCCHC11-215ENST00000494469 MYO15BQ96JP2 1530 aa17.54■□□□□ 0.4
ZCCHC11-215ENST00000494469 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
ZCCHC11-215ENST00000494469 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
ZCCHC11-215ENST00000494469 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
ZCCHC11-215ENST00000494469 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
ZCCHC11-215ENST00000494469 CAPN15O75808 1086 aa17.36■□□□□ 0.37
ZCCHC11-215ENST00000494469 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
ZCCHC11-215ENST00000494469 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
ZCCHC11-215ENST00000494469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
ZCCHC11-215ENST00000494469 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
ZCCHC11-215ENST00000494469 APLP2Q06481 763 aa17.25■□□□□ 0.35
ZCCHC11-215ENST00000494469 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
ZCCHC11-215ENST00000494469 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
ZCCHC11-215ENST00000494469 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
ZCCHC11-215ENST00000494469 DSG3P32926 999 aa17.15■□□□□ 0.34
ZCCHC11-215ENST00000494469 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
ZCCHC11-215ENST00000494469 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
ZCCHC11-215ENST00000494469 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
ZCCHC11-215ENST00000494469 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
ZCCHC11-215ENST00000494469 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
ZCCHC11-215ENST00000494469 ABCB7O75027 752 aa16.98■□□□□ 0.31
ZCCHC11-215ENST00000494469 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
ZCCHC11-215ENST00000494469 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
ZCCHC11-215ENST00000494469 ZBTB22O15209 634 aa16.9■□□□□ 0.3
ZCCHC11-215ENST00000494469 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
ZCCHC11-215ENST00000494469 POLA2Q14181 598 aa16.71■□□□□ 0.27
ZCCHC11-215ENST00000494469 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
ZCCHC11-215ENST00000494469 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
ZCCHC11-215ENST00000494469 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
ZCCHC11-215ENST00000494469 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
ZCCHC11-215ENST00000494469 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
ZCCHC11-215ENST00000494469 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
ZCCHC11-215ENST00000494469 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
ZCCHC11-215ENST00000494469 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
ZCCHC11-215ENST00000494469 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
ZCCHC11-215ENST00000494469 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
ZCCHC11-215ENST00000494469 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
ZCCHC11-215ENST00000494469 MROH2BQ7Z745 1585 aa16.24■□□□□ 0.19
ZCCHC11-215ENST00000494469 NESP48681 1621 aa16.23■□□□□ 0.19
ZCCHC11-215ENST00000494469 PEG3Q9GZU2 1588 aa16.22■□□□□ 0.19
ZCCHC11-215ENST00000494469 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
ZCCHC11-215ENST00000494469 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
ZCCHC11-215ENST00000494469 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
ZCCHC11-215ENST00000494469 CUX2O14529 1486 aa16.14■□□□□ 0.17
ZCCHC11-215ENST00000494469 ERCC6Q03468 1493 aa16.13■□□□□ 0.17
ZCCHC11-215ENST00000494469 FBLN2P98095 1184 aa16.11■□□□□ 0.17
ZCCHC11-215ENST00000494469 POTEHQ6S545 545 aa16.07■□□□□ 0.16
ZCCHC11-215ENST00000494469 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
ZCCHC11-215ENST00000494469 WIZO95785 1651 aa16.03■□□□□ 0.16
ZCCHC11-215ENST00000494469 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
ZCCHC11-215ENST00000494469 LAMC3Q9Y6N6 1575 aa16■□□□□ 0.15
ZCCHC11-215ENST00000494469 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
ZCCHC11-215ENST00000494469 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
ZCCHC11-215ENST00000494469 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
ZCCHC11-215ENST00000494469 CHRDL2Q6WN34 429 aa15.92■□□□□ 0.14
ZCCHC11-215ENST00000494469 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
ZCCHC11-215ENST00000494469 SPDYE2BA6NHP3 402 aa15.9■□□□□ 0.14
ZCCHC11-215ENST00000494469 SPDYE6P0CI01 402 aa15.9■□□□□ 0.14
ZCCHC11-215ENST00000494469 SPDYE2Q495Y8 402 aa15.9■□□□□ 0.14
ZCCHC11-215ENST00000494469 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
ZCCHC11-215ENST00000494469 REM2Q8IYK8 340 aaPredicted RBP15.89■□□□□ 0.13
ZCCHC11-215ENST00000494469 CFTRP13569 1480 aa15.78■□□□□ 0.12
ZCCHC11-215ENST00000494469 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
ZCCHC11-215ENST00000494469 ZNF692Q9BU19 519 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 1012 ms