RNA–Protein interactions for RNA: ENST00000528457.5

ZCCHC11-219, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 3

Gene ZCCHC11, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-219ENST00000528457 AEBP2Q6ZN18 517 aaPredicted RBP15.42■□□□□ 0.06
ZCCHC11-219ENST00000528457 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
ZCCHC11-219ENST00000528457 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.25
ZCCHC11-219ENST00000528457 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
ZCCHC11-219ENST00000528457 PLPPR3Q6T4P5 718 aa12.64□□□□□ -0.39
ZCCHC11-219ENST00000528457 FOXD1Q16676 465 aa12.12□□□□□ -0.47
ZCCHC11-219ENST00000528457 NISCHQ9Y2I1 1504 aa11.92□□□□□ -0.5
ZCCHC11-219ENST00000528457 ADRA2BP18089 450 aa11.82□□□□□ -0.52
ZCCHC11-219ENST00000528457 PPP6R1Q9UPN7 881 aa11.79□□□□□ -0.52
ZCCHC11-219ENST00000528457 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
ZCCHC11-219ENST00000528457 ABCC9O60706 1549 aa11.3□□□□□ -0.6
ZCCHC11-219ENST00000528457 MSH5O43196 834 aa11.2□□□□□ -0.62
ZCCHC11-219ENST00000528457 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
ZCCHC11-219ENST00000528457 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
ZCCHC11-219ENST00000528457 KCNA4P22459 653 aa11.08□□□□□ -0.64
ZCCHC11-219ENST00000528457 NCBP3Q53F19 620 aaKnown RBP10.99□□□□□ -0.65
ZCCHC11-219ENST00000528457 SCAF1Q9H7N4 1312 aaKnown RBP10.98□□□□□ -0.65
ZCCHC11-219ENST00000528457 CCDC180Q9P1Z9 1646 aa10.94□□□□□ -0.66
ZCCHC11-219ENST00000528457 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
ZCCHC11-219ENST00000528457 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
ZCCHC11-219ENST00000528457 SLC4A1APQ9BWU0 796 aaKnown RBP10.65□□□□□ -0.7
ZCCHC11-219ENST00000528457 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
ZCCHC11-219ENST00000528457 MAPK8IP2Q13387 824 aaPredicted RBP10.63□□□□□ -0.71
ZCCHC11-219ENST00000528457 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
ZCCHC11-219ENST00000528457 RNF216Q9NWF9 866 aaPredicted RBP10.53□□□□□ -0.72
ZCCHC11-219ENST00000528457 DMRT2Q9Y5R5 561 aa10.53□□□□□ -0.72
ZCCHC11-219ENST00000528457 UNC13AQ9UPW8 1703 aa10.52□□□□□ -0.73
ZCCHC11-219ENST00000528457 DNAJC5Q9H3Z4 198 aa10.47□□□□□ -0.73
ZCCHC11-219ENST00000528457 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
ZCCHC11-219ENST00000528457 NACADO15069 1562 aa10.4□□□□□ -0.74
ZCCHC11-219ENST00000528457 BICRAQ9NZM4 1560 aa10.39□□□□□ -0.75
ZCCHC11-219ENST00000528457 HOXD11P31277 338 aaPredicted RBP10.39□□□□□ -0.75
ZCCHC11-219ENST00000528457 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
ZCCHC11-219ENST00000528457 CC2D2AQ9P2K1 1620 aa10.25□□□□□ -0.77
ZCCHC11-219ENST00000528457 CECR2Q9BXF3 1484 aa10.22□□□□□ -0.77
ZCCHC11-219ENST00000528457 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
ZCCHC11-219ENST00000528457 MYO15BQ96JP2 1530 aa10.14□□□□□ -0.79
ZCCHC11-219ENST00000528457 ZBTB22O15209 634 aa10.14□□□□□ -0.79
ZCCHC11-219ENST00000528457 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
ZCCHC11-219ENST00000528457 EIF4G1Q04637 1599 aaKnown RBP10.09□□□□□ -0.79
ZCCHC11-219ENST00000528457 DCAF8L2P0C7V8 631 aa10.09□□□□□ -0.79
ZCCHC11-219ENST00000528457 SHROOM4Q9ULL8 1493 aa10.09□□□□□ -0.79
ZCCHC11-219ENST00000528457 POTEDQ86YR6 584 aa10.04□□□□□ -0.8
ZCCHC11-219ENST00000528457 SLC4A2P04920 1241 aa10.02□□□□□ -0.81
ZCCHC11-219ENST00000528457 MYCNP04198 464 aaPredicted RBP9.97□□□□□ -0.81
ZCCHC11-219ENST00000528457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.96□□□□□ -0.829e-7■■□□□ 12.2
ZCCHC11-219ENST00000528457 CUX2O14529 1486 aa9.92□□□□□ -0.82
ZCCHC11-219ENST00000528457 SCRIBQ14160 1630 aa9.86□□□□□ -0.83
ZCCHC11-219ENST00000528457 ATXN8OSP0DMR3 200 aa9.86□□□□□ -0.83
ZCCHC11-219ENST00000528457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.85□□□□□ -0.83
ZCCHC11-219ENST00000528457 HNRNPUL2Q1KMD3 747 aaKnown RBP9.85□□□□□ -0.83
ZCCHC11-219ENST00000528457 DCAF1Q9Y4B6 1507 aa9.84□□□□□ -0.83
ZCCHC11-219ENST00000528457 SAMD1Q6SPF0 538 aaPredicted RBP9.79□□□□□ -0.84
ZCCHC11-219ENST00000528457 ZCCHC6Q5VYS8 1495 aaKnown RBP9.79□□□□□ -0.84
ZCCHC11-219ENST00000528457 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
ZCCHC11-219ENST00000528457 APLP2Q06481 763 aa9.73□□□□□ -0.85
ZCCHC11-219ENST00000528457 TRIM41Q8WV44 630 aa9.71□□□□□ -0.86
ZCCHC11-219ENST00000528457 ERCC6Q03468 1493 aa9.7□□□□□ -0.86
ZCCHC11-219ENST00000528457 THOC2Q8NI27 1593 aaKnown RBP9.66□□□□□ -0.86
ZCCHC11-219ENST00000528457 NESP48681 1621 aa9.63□□□□□ -0.87
ZCCHC11-219ENST00000528457 NCAPD3P42695 1498 aa9.62□□□□□ -0.87
ZCCHC11-219ENST00000528457 ATF5Q9Y2D1 282 aaPredicted RBP9.55□□□□□ -0.88
ZCCHC11-219ENST00000528457 RNF39Q9H2S5 420 aa9.54□□□□□ -0.88
ZCCHC11-219ENST00000528457 KIF21AQ7Z4S6 1674 aa9.54□□□□□ -0.88
ZCCHC11-219ENST00000528457 ATAD2BQ9ULI0 1458 aa9.52□□□□□ -0.89
ZCCHC11-219ENST00000528457 C1QBPQ07021 282 aaKnown RBP9.51□□□□□ -0.89
ZCCHC11-219ENST00000528457 HMGXB3Q12766 1538 aa9.5□□□□□ -0.89
ZCCHC11-219ENST00000528457 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
ZCCHC11-219ENST00000528457 LAMC3Q9Y6N6 1575 aa9.46□□□□□ -0.89
ZCCHC11-219ENST00000528457 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
ZCCHC11-219ENST00000528457 BAZ1AQ9NRL2 1556 aaPredicted RBP9.44□□□□□ -0.9
ZCCHC11-219ENST00000528457 CAPN15O75808 1086 aa9.42□□□□□ -0.9
ZCCHC11-219ENST00000528457 RTN4Q9NQC3 1192 aaKnown RBP9.42□□□□□ -0.9
ZCCHC11-219ENST00000528457 SMARCA4P51532 1647 aa9.42□□□□□ -0.9
ZCCHC11-219ENST00000528457 TRHP20396 242 aaPredicted RBP9.41□□□□□ -0.9
ZCCHC11-219ENST00000528457 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
ZCCHC11-219ENST00000528457 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
ZCCHC11-219ENST00000528457 RIMBP3CA6NJZ7 1639 aa9.38□□□□□ -0.91
ZCCHC11-219ENST00000528457 RIMBP3BA6NNM3 1639 aa9.38□□□□□ -0.91
ZCCHC11-219ENST00000528457 RIMBP3Q9UFD9 1639 aa9.38□□□□□ -0.91
ZCCHC11-219ENST00000528457 WDR62O43379 1518 aa9.38□□□□□ -0.91
ZCCHC11-219ENST00000528457 SPINK5Q9NQ38 1064 aaPredicted RBP9.38□□□□□ -0.91
ZCCHC11-219ENST00000528457 FKBP8Q14318 412 aa9.37□□□□□ -0.91
ZCCHC11-219ENST00000528457 PEG3Q9GZU2 1588 aa9.36□□□□□ -0.91
ZCCHC11-219ENST00000528457 OSCARQ8IYS5 282 aa9.35□□□□□ -0.91
ZCCHC11-219ENST00000528457 PDS5BQ9NTI5 1447 aa9.35□□□□□ -0.91
ZCCHC11-219ENST00000528457 MRC2Q9UBG0 1479 aa9.34□□□□□ -0.91
ZCCHC11-219ENST00000528457 BAZ1BQ9UIG0 1483 aaKnown RBP9.34□□□□□ -0.91
ZCCHC11-219ENST00000528457 FBLN2P98095 1184 aa9.3□□□□□ -0.92
ZCCHC11-219ENST00000528457 POLA2Q14181 598 aa9.3□□□□□ -0.92
ZCCHC11-219ENST00000528457 ARHGEF11O15085 1522 aa9.27□□□□□ -0.93
ZCCHC11-219ENST00000528457 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
ZCCHC11-219ENST00000528457 CADPSQ9ULU8 1353 aa9.26□□□□□ -0.93
ZCCHC11-219ENST00000528457 ABCB7O75027 752 aa9.2□□□□□ -0.94
ZCCHC11-219ENST00000528457 MROH2BQ7Z745 1585 aa9.2□□□□□ -0.94
ZCCHC11-219ENST00000528457 CEP164Q9UPV0 1460 aa9.18□□□□□ -0.94
ZCCHC11-219ENST00000528457 CACNB1Q02641 598 aaPredicted RBP9.17□□□□□ -0.94
ZCCHC11-219ENST00000528457 URB2Q14146 1524 aaKnown RBP9.16□□□□□ -0.94
ZCCHC11-219ENST00000528457 ARAP1Q96P48 1450 aa9.16□□□□□ -0.94
ZCCHC11-219ENST00000528457 SPDYE4A6NLX3 237 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms