RNA–Protein interactions for RNA: ENST00000496292.5

ARF4-209, Transcript of ADP ribosylation factor 4, humanhuman

TSL 5 BASIC

Gene ARF4, Length 1,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-209ENST00000496292 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
ARF4-209ENST00000496292 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
ARF4-209ENST00000496292 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.49
ARF4-209ENST00000496292 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
ARF4-209ENST00000496292 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
ARF4-209ENST00000496292 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
ARF4-209ENST00000496292 FOXD1Q16676 465 aa16.29■□□□□ 0.2
ARF4-209ENST00000496292 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
ARF4-209ENST00000496292 ADRA2BP18089 450 aa15.87■□□□□ 0.13
ARF4-209ENST00000496292 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
ARF4-209ENST00000496292 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
ARF4-209ENST00000496292 MSH5O43196 834 aa14.9□□□□□ -0.02
ARF4-209ENST00000496292 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
ARF4-209ENST00000496292 KCNA4P22459 653 aa14.73□□□□□ -0.05
ARF4-209ENST00000496292 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
ARF4-209ENST00000496292 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
ARF4-209ENST00000496292 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
ARF4-209ENST00000496292 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
ARF4-209ENST00000496292 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
ARF4-209ENST00000496292 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
ARF4-209ENST00000496292 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
ARF4-209ENST00000496292 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
ARF4-209ENST00000496292 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
ARF4-209ENST00000496292 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
ARF4-209ENST00000496292 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
ARF4-209ENST00000496292 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
ARF4-209ENST00000496292 ZCCHC6Q5VYS8 1495 aaKnown RBP13.81□□□□□ -0.2
ARF4-209ENST00000496292 ABCC9O60706 1549 aa13.78□□□□□ -0.2
ARF4-209ENST00000496292 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
ARF4-209ENST00000496292 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
ARF4-209ENST00000496292 MYO15BQ96JP2 1530 aa13.62□□□□□ -0.23
ARF4-209ENST00000496292 DCAF8L2P0C7V8 631 aa13.58□□□□□ -0.24
ARF4-209ENST00000496292 ZBTB22O15209 634 aa13.57□□□□□ -0.24
ARF4-209ENST00000496292 NACADO15069 1562 aa13.55□□□□□ -0.24
ARF4-209ENST00000496292 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
ARF4-209ENST00000496292 FOXD4L1Q9NU39 408 aa13.47□□□□□ -0.25
ARF4-209ENST00000496292 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
ARF4-209ENST00000496292 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
ARF4-209ENST00000496292 SCRIBQ14160 1630 aa13.23□□□□□ -0.29
ARF4-209ENST00000496292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.3
ARF4-209ENST00000496292 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
ARF4-209ENST00000496292 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
ARF4-209ENST00000496292 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
ARF4-209ENST00000496292 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
ARF4-209ENST00000496292 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
ARF4-209ENST00000496292 BICRAQ9NZM4 1560 aa13.02□□□□□ -0.33
ARF4-209ENST00000496292 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
ARF4-209ENST00000496292 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
ARF4-209ENST00000496292 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
ARF4-209ENST00000496292 PABPN1Q86U42 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
ARF4-209ENST00000496292 SAMD1Q6SPF0 538 aaPredicted RBP12.9□□□□□ -0.34
ARF4-209ENST00000496292 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
ARF4-209ENST00000496292 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
ARF4-209ENST00000496292 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
ARF4-209ENST00000496292 CECR2Q9BXF3 1484 aa12.76□□□□□ -0.37
ARF4-209ENST00000496292 APLP2Q06481 763 aa12.72□□□□□ -0.37
ARF4-209ENST00000496292 SMARCA4P51532 1647 aa12.71□□□□□ -0.37
ARF4-209ENST00000496292 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
ARF4-209ENST00000496292 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
ARF4-209ENST00000496292 C1QBPQ07021 282 aaKnown RBP12.66□□□□□ -0.38
ARF4-209ENST00000496292 EIF4G1Q04637 1599 aaKnown RBP12.66□□□□□ -0.38
ARF4-209ENST00000496292 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
ARF4-209ENST00000496292 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
ARF4-209ENST00000496292 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
ARF4-209ENST00000496292 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
ARF4-209ENST00000496292 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
ARF4-209ENST00000496292 WIZO95785 1651 aa12.57□□□□□ -0.4
ARF4-209ENST00000496292 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
ARF4-209ENST00000496292 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
ARF4-209ENST00000496292 CAPN15O75808 1086 aa12.53□□□□□ -0.4
ARF4-209ENST00000496292 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
ARF4-209ENST00000496292 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
ARF4-209ENST00000496292 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
ARF4-209ENST00000496292 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
ARF4-209ENST00000496292 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.41
ARF4-209ENST00000496292 POLA2Q14181 598 aa12.4□□□□□ -0.42
ARF4-209ENST00000496292 FKBP8Q14318 412 aa12.34□□□□□ -0.43
ARF4-209ENST00000496292 CCDC88BA6NC98 1476 aa12.31□□□□□ -0.44
ARF4-209ENST00000496292 ABCB7O75027 752 aa12.31□□□□□ -0.44
ARF4-209ENST00000496292 DSG3P32926 999 aa12.28□□□□□ -0.44
ARF4-209ENST00000496292 MKRN4PQ13434 485 aaPredicted RBP12.27□□□□□ -0.44
ARF4-209ENST00000496292 POTEHQ6S545 545 aa12.26□□□□□ -0.45
ARF4-209ENST00000496292 FBLN2P98095 1184 aa12.23□□□□□ -0.45
ARF4-209ENST00000496292 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
ARF4-209ENST00000496292 CFTRP13569 1480 aa12.16□□□□□ -0.46
ARF4-209ENST00000496292 CADPSQ9ULU8 1353 aa12.14□□□□□ -0.47
ARF4-209ENST00000496292 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
ARF4-209ENST00000496292 PRDM2Q13029 1718 aa12.1□□□□□ -0.47
ARF4-209ENST00000496292 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
ARF4-209ENST00000496292 NESP48681 1621 aa12.04□□□□□ -0.48
ARF4-209ENST00000496292 PDS5BQ9NTI5 1447 aa12.02□□□□□ -0.49
ARF4-209ENST00000496292 FANCD2Q9BXW9 1451 aa12□□□□□ -0.49
ARF4-209ENST00000496292 WRNQ14191 1432 aaPredicted RBP eCLIP11.96□□□□□ -0.49
ARF4-209ENST00000496292 ABCC8Q09428 1581 aa11.96□□□□□ -0.5
ARF4-209ENST00000496292 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.5
ARF4-209ENST00000496292 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
ARF4-209ENST00000496292 PROM2Q8N271 834 aa11.94□□□□□ -0.5
ARF4-209ENST00000496292 TRIM41Q8WV44 630 aa11.94□□□□□ -0.5
ARF4-209ENST00000496292 KIF21AQ7Z4S6 1674 aa11.92□□□□□ -0.5
ARF4-209ENST00000496292 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms