RNA–Protein interactions for RNA: ENST00000404760.5

BRD1-203, Transcript of bromodomain containing 1, humanhuman

TSL 2 BASIC

Gene BRD1, Length 4,550 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-203ENST00000404760 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
BRD1-203ENST00000404760 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
BRD1-203ENST00000404760 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
BRD1-203ENST00000404760 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
BRD1-203ENST00000404760 CCDC180Q9P1Z9 1646 aa18.91■□□□□ 0.62
BRD1-203ENST00000404760 EHMT2Q96KQ7 1210 aa18.89■□□□□ 0.61
BRD1-203ENST00000404760 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
BRD1-203ENST00000404760 APLP2Q06481 763 aa18.52■□□□□ 0.56
BRD1-203ENST00000404760 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
BRD1-203ENST00000404760 PELP1Q8IZL8 1130 aaKnown RBP18.31■□□□□ 0.52
BRD1-203ENST00000404760 TRIM41Q8WV44 630 aa18.27■□□□□ 0.52
BRD1-203ENST00000404760 ZEB1P37275 1124 aaPredicted RBP18.26■□□□□ 0.51
BRD1-203ENST00000404760 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
BRD1-203ENST00000404760 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
BRD1-203ENST00000404760 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
BRD1-203ENST00000404760 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
BRD1-203ENST00000404760 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
BRD1-203ENST00000404760 CENPBP07199 599 aaPredicted RBP17.85■□□□□ 0.45
BRD1-203ENST00000404760 PPARGC1BQ86YN6 1023 aaKnown RBP17.85■□□□□ 0.45
BRD1-203ENST00000404760 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
BRD1-203ENST00000404760 ABCC9O60706 1549 aa17.82■□□□□ 0.44
BRD1-203ENST00000404760 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
BRD1-203ENST00000404760 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
BRD1-203ENST00000404760 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
BRD1-203ENST00000404760 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
BRD1-203ENST00000404760 HRCP23327 699 aa17.73■□□□□ 0.43
BRD1-203ENST00000404760 NACADO15069 1562 aa17.59■□□□□ 0.41
BRD1-203ENST00000404760 ATP1B4Q9UN42 357 aaPredicted RBP17.57■□□□□ 0.4
BRD1-203ENST00000404760 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
BRD1-203ENST00000404760 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.38
BRD1-203ENST00000404760 NEFLP07196 543 aa17.34■□□□□ 0.37
BRD1-203ENST00000404760 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.351e-8■□□□□ 9.4
BRD1-203ENST00000404760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
BRD1-203ENST00000404760 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
BRD1-203ENST00000404760 ERICH6Q7L0X2 663 aa17.21■□□□□ 0.35
BRD1-203ENST00000404760 MYT1Q01538 1121 aa17.2■□□□□ 0.34
BRD1-203ENST00000404760 ITGAEP38570 1179 aa17.18■□□□□ 0.34
BRD1-203ENST00000404760 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
BRD1-203ENST00000404760 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
BRD1-203ENST00000404760 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
BRD1-203ENST00000404760 CNGB1Q14028 1251 aaPredicted RBP16.83■□□□□ 0.29
BRD1-203ENST00000404760 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
BRD1-203ENST00000404760 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
BRD1-203ENST00000404760 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
BRD1-203ENST00000404760 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
BRD1-203ENST00000404760 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
BRD1-203ENST00000404760 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
BRD1-203ENST00000404760 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
BRD1-203ENST00000404760 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
BRD1-203ENST00000404760 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
BRD1-203ENST00000404760 EEA1Q15075 1411 aa16.65■□□□□ 0.26
BRD1-203ENST00000404760 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
BRD1-203ENST00000404760 CDK11AQ9UQ88 783 aaPredicted RBP16.62■□□□□ 0.25
BRD1-203ENST00000404760 BCANQ96GW7 911 aa16.6■□□□□ 0.25
BRD1-203ENST00000404760 ANP32CO43423 234 aa16.6■□□□□ 0.25
BRD1-203ENST00000404760 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.24
BRD1-203ENST00000404760 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
BRD1-203ENST00000404760 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
BRD1-203ENST00000404760 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
BRD1-203ENST00000404760 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
BRD1-203ENST00000404760 FBLN2P98095 1184 aa16.44■□□□□ 0.22
BRD1-203ENST00000404760 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
BRD1-203ENST00000404760 MROH2BQ7Z745 1585 aa16.42■□□□□ 0.22
BRD1-203ENST00000404760 UNC13AQ9UPW8 1703 aa16.39■□□□□ 0.21
BRD1-203ENST00000404760 CLIP1P30622 1438 aa16.38■□□□□ 0.21
BRD1-203ENST00000404760 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
BRD1-203ENST00000404760 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
BRD1-203ENST00000404760 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
BRD1-203ENST00000404760 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
BRD1-203ENST00000404760 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
BRD1-203ENST00000404760 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
BRD1-203ENST00000404760 ZNF326Q5BKZ1 582 aaKnown RBP16.32■□□□□ 0.2
BRD1-203ENST00000404760 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
BRD1-203ENST00000404760 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
BRD1-203ENST00000404760 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
BRD1-203ENST00000404760 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
BRD1-203ENST00000404760 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
BRD1-203ENST00000404760 WIZO95785 1651 aa16.29■□□□□ 0.2
BRD1-203ENST00000404760 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
BRD1-203ENST00000404760 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.19
BRD1-203ENST00000404760 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
BRD1-203ENST00000404760 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
BRD1-203ENST00000404760 MTUS2Q5JR59 1369 aa16.24■□□□□ 0.19
BRD1-203ENST00000404760 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
BRD1-203ENST00000404760 MIER1Q8N108 512 aa16.2■□□□□ 0.18
BRD1-203ENST00000404760 NEFMP07197 916 aa16.18■□□□□ 0.18
BRD1-203ENST00000404760 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
BRD1-203ENST00000404760 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
BRD1-203ENST00000404760 TSPY4P0CV99 314 aa16.16■□□□□ 0.18
BRD1-203ENST00000404760 TSPY10P0CW01 314 aa16.16■□□□□ 0.18
BRD1-203ENST00000404760 FKBP8Q14318 412 aa16.14■□□□□ 0.17
BRD1-203ENST00000404760 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
BRD1-203ENST00000404760 ZBTB47Q9UFB7 747 aaPredicted RBP16.13■□□□□ 0.17
BRD1-203ENST00000404760 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
BRD1-203ENST00000404760 CCDC88BA6NC98 1476 aa16.12■□□□□ 0.17
BRD1-203ENST00000404760 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
BRD1-203ENST00000404760 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
BRD1-203ENST00000404760 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
BRD1-203ENST00000404760 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
BRD1-203ENST00000404760 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms