RNA–Protein interactions for RNA: ENST00000623028.1

VGLL4-218, Transcript of vestigial like family member 4, humanhuman

TSL 5

Gene VGLL4, Length 728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-218ENST00000623028 NISCHQ9Y2I1 1504 aa46.1■■■■■ 4.97
VGLL4-218ENST00000623028 CCDC180Q9P1Z9 1646 aa41.08■■■■■ 4.17
VGLL4-218ENST00000623028 ABCC9O60706 1549 aa40.35■■■■■ 4.05
VGLL4-218ENST00000623028 RB1CC1Q8TDY2 1594 aa38.67■■■■□ 3.78
VGLL4-218ENST00000623028 NACADO15069 1562 aa38.57■■■■□ 3.76
VGLL4-218ENST00000623028 DCAF8L2P0C7V8 631 aa38.53■■■■□ 3.76
VGLL4-218ENST00000623028 ZCCHC6Q5VYS8 1495 aaKnown RBP38.41■■■■□ 3.74
VGLL4-218ENST00000623028 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
VGLL4-218ENST00000623028 DCAF1Q9Y4B6 1507 aa38.06■■■■□ 3.68
VGLL4-218ENST00000623028 UNC13AQ9UPW8 1703 aa38.01■■■■□ 3.68
VGLL4-218ENST00000623028 PABPN1Q86U42 306 aaKnown RBP eCLIP37.64■■■■□ 3.62
VGLL4-218ENST00000623028 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
VGLL4-218ENST00000623028 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
VGLL4-218ENST00000623028 DNAJC5BQ9UF47 199 aa37.12■■■■□ 3.53
VGLL4-218ENST00000623028 SHROOM4Q9ULL8 1493 aa37.01■■■■□ 3.51
VGLL4-218ENST00000623028 EIF4G1Q04637 1599 aaKnown RBP36.59■■■■□ 3.45
VGLL4-218ENST00000623028 CC2D2AQ9P2K1 1620 aa36.49■■■■□ 3.43
VGLL4-218ENST00000623028 CECR2Q9BXF3 1484 aa36.2■■■■□ 3.39
VGLL4-218ENST00000623028 SMARCA4P51532 1647 aa35.86■■■■□ 3.33
VGLL4-218ENST00000623028 BAZ1AQ9NRL2 1556 aaPredicted RBP35.72■■■■□ 3.31
VGLL4-218ENST00000623028 ATAD2BQ9ULI0 1458 aa35.62■■■■□ 3.29
VGLL4-218ENST00000623028 MROH2BQ7Z745 1585 aa35.6■■■■□ 3.29
VGLL4-218ENST00000623028 NCAPD3P42695 1498 aa35.56■■■■□ 3.28
VGLL4-218ENST00000623028 SMARCA2P51531 1590 aa35.55■■■■□ 3.28
VGLL4-218ENST00000623028 PEG3Q9GZU2 1588 aa35.44■■■■□ 3.26
VGLL4-218ENST00000623028 HMGXB3Q12766 1538 aa35.44■■■■□ 3.26
VGLL4-218ENST00000623028 BAZ1BQ9UIG0 1483 aaKnown RBP35.34■■■■□ 3.25
VGLL4-218ENST00000623028 WIZO95785 1651 aa35.27■■■■□ 3.24
VGLL4-218ENST00000623028 RSF1Q96T23 1441 aaPredicted RBP35.07■■■■□ 3.21
VGLL4-218ENST00000623028 NESP48681 1621 aa34.92■■■■□ 3.18
VGLL4-218ENST00000623028 TOP2AP11388 1531 aaKnown RBP34.8■■■■□ 3.16
VGLL4-218ENST00000623028 ERCC6Q03468 1493 aa34.71■■■■□ 3.15
VGLL4-218ENST00000623028 LAMC3Q9Y6N6 1575 aa34.7■■■■□ 3.14
VGLL4-218ENST00000623028 KIF21AQ7Z4S6 1674 aa34.56■■■■□ 3.12
VGLL4-218ENST00000623028 CADPSQ9ULU8 1353 aa34.51■■■■□ 3.12
VGLL4-218ENST00000623028 THOC2Q8NI27 1593 aaKnown RBP34.42■■■■□ 3.1
VGLL4-218ENST00000623028 PDS5BQ9NTI5 1447 aa34.38■■■■□ 3.09
VGLL4-218ENST00000623028 CCDC88BA6NC98 1476 aa34.36■■■■□ 3.09
VGLL4-218ENST00000623028 CUX2O14529 1486 aa34.34■■■■□ 3.09
VGLL4-218ENST00000623028 CFTRP13569 1480 aa34.32■■■■□ 3.08
VGLL4-218ENST00000623028 PRDM2Q13029 1718 aa34.21■■■■□ 3.07
VGLL4-218ENST00000623028 FANCD2Q9BXW9 1451 aa34.2■■■■□ 3.06
VGLL4-218ENST00000623028 CEP164Q9UPV0 1460 aa34.16■■■■□ 3.06
VGLL4-218ENST00000623028 MRC2Q9UBG0 1479 aa34.14■■■■□ 3.06
VGLL4-218ENST00000623028 SUPT5HO00267 1087 aaKnown RBP34.1■■■■□ 3.05
VGLL4-218ENST00000623028 WDR62O43379 1518 aa34.05■■■■□ 3.04
VGLL4-218ENST00000623028 URB2Q14146 1524 aaKnown RBP33.92■■■■□ 3.02
VGLL4-218ENST00000623028 TOPBP1Q92547 1522 aa33.66■■■□□ 2.98
VGLL4-218ENST00000623028 DNMBPQ6XZF7 1577 aa33.61■■■□□ 2.97
VGLL4-218ENST00000623028 ABCC8Q09428 1581 aa33.5■■■□□ 2.95
VGLL4-218ENST00000623028 IFT140Q96RY7 1462 aa33.41■■■□□ 2.94
VGLL4-218ENST00000623028 CUX1P39880 1505 aa33.4■■■□□ 2.94
VGLL4-218ENST00000623028 DNAJC5Q9H3Z4 198 aa33.39■■■□□ 2.94
VGLL4-218ENST00000623028 ZNF608Q9ULD9 1512 aaPredicted RBP33.38■■■□□ 2.93
VGLL4-218ENST00000623028 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
VGLL4-218ENST00000623028 TARBP1Q13395 1621 aaKnown RBP33.35■■■□□ 2.93
VGLL4-218ENST00000623028 FGD5Q6ZNL6 1462 aa33.29■■■□□ 2.92
VGLL4-218ENST00000623028 EIF4G3O43432 1585 aaKnown RBP33.28■■■□□ 2.92
VGLL4-218ENST00000623028 RAD54L2Q9Y4B4 1467 aa33.26■■■□□ 2.92
VGLL4-218ENST00000623028 SOGA1O94964 1423 aa33.15■■■□□ 2.9
VGLL4-218ENST00000623028 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.896e-7■■■■■ 27.3
VGLL4-218ENST00000623028 SYNJ1O43426 1573 aa33.12■■■□□ 2.89
VGLL4-218ENST00000623028 WDR97A6NE52 1622 aa33.11■■■□□ 2.89
VGLL4-218ENST00000623028 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
VGLL4-218ENST00000623028 WRNQ14191 1432 aaPredicted RBP eCLIP33.06■■■□□ 2.88
VGLL4-218ENST00000623028 TOP2BQ02880 1626 aa33.05■■■□□ 2.88
VGLL4-218ENST00000623028 TDRD9Q8NDG6 1382 aaKnown RBP33.04■■■□□ 2.88
VGLL4-218ENST00000623028 CHD1O14646 1710 aa32.94■■■□□ 2.86
VGLL4-218ENST00000623028 PBRM1Q86U86 1689 aa32.89■■■□□ 2.86
VGLL4-218ENST00000623028 ABCA10Q8WWZ4 1543 aa32.89■■■□□ 2.86
VGLL4-218ENST00000623028 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
VGLL4-218ENST00000623028 SNAPC4Q5SXM2 1469 aa32.85■■■□□ 2.85
VGLL4-218ENST00000623028 OSCARQ8IYS5 282 aa32.82■■■□□ 2.84
VGLL4-218ENST00000623028 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
VGLL4-218ENST00000623028 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
VGLL4-218ENST00000623028 MAGI1Q96QZ7 1491 aaPredicted RBP32.72■■■□□ 2.83
VGLL4-218ENST00000623028 FBLN2P98095 1184 aa32.7■■■□□ 2.83
VGLL4-218ENST00000623028 SYNJ2O15056 1496 aa32.61■■■□□ 2.81
VGLL4-218ENST00000623028 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
VGLL4-218ENST00000623028 RIMBP3CA6NJZ7 1639 aa32.53■■■□□ 2.8
VGLL4-218ENST00000623028 RIMBP3BA6NNM3 1639 aa32.53■■■□□ 2.8
VGLL4-218ENST00000623028 RIMBP3Q9UFD9 1639 aa32.53■■■□□ 2.8
VGLL4-218ENST00000623028 CHMP7Q8WUX9 453 aaPredicted RBP32.53■■■□□ 2.8
VGLL4-218ENST00000623028 ERICH3Q5RHP9 1530 aa32.49■■■□□ 2.79
VGLL4-218ENST00000623028 CLASP1Q7Z460 1538 aa32.48■■■□□ 2.79
VGLL4-218ENST00000623028 ARHGEF11O15085 1522 aa32.46■■■□□ 2.79
VGLL4-218ENST00000623028 GRIN2AQ12879 1464 aa32.42■■■□□ 2.78
VGLL4-218ENST00000623028 FHAD1B1AJZ9 1412 aa32.38■■■□□ 2.77
VGLL4-218ENST00000623028 TRIM41Q8WV44 630 aa32.35■■■□□ 2.77
VGLL4-218ENST00000623028 CEP170Q5SW79 1584 aa32.34■■■□□ 2.77
VGLL4-218ENST00000623028 KIF27Q86VH2 1401 aa32.33■■■□□ 2.77
VGLL4-218ENST00000623028 NUP160Q12769 1436 aa32.25■■■□□ 2.75
VGLL4-218ENST00000623028 CUL7Q14999 1698 aa32.23■■■□□ 2.75
VGLL4-218ENST00000623028 IGF1RP08069 1367 aa32.22■■■□□ 2.75
VGLL4-218ENST00000623028 ARAP1Q96P48 1450 aa32.21■■■□□ 2.75
VGLL4-218ENST00000623028 RUSC2Q8N2Y8 1516 aa32.17■■■□□ 2.74
VGLL4-218ENST00000623028 ERCC6L2Q5T890 1561 aa32.11■■■□□ 2.73
VGLL4-218ENST00000623028 SHROOM2Q13796 1616 aa32.09■■■□□ 2.73
VGLL4-218ENST00000623028 CYB5RLQ6IPT4 315 aa32.08■■■□□ 2.73
VGLL4-218ENST00000623028 CARMIL1Q5VZK9 1371 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms