RNA–Protein interactions for RNA: ENST00000340857.3

H1F0-201, Transcript of H1 histone family member 0, humanhuman

APPRIS P1 BASIC

Gene H1F0, Length 2,344 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H1F0-201ENST00000340857 NISCHQ9Y2I1 1504 aa34.94■■■■□ 3.18
H1F0-201ENST00000340857 CCDC180Q9P1Z9 1646 aa30.61■■■□□ 2.49
H1F0-201ENST00000340857 ABCC9O60706 1549 aa29.58■■■□□ 2.33
H1F0-201ENST00000340857 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
H1F0-201ENST00000340857 DCAF8L2P0C7V8 631 aa29.13■■■□□ 2.25
H1F0-201ENST00000340857 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.2
H1F0-201ENST00000340857 MYO15BQ96JP2 1530 aa28.68■■■□□ 2.18
H1F0-201ENST00000340857 NACADO15069 1562 aa28.68■■■□□ 2.18
H1F0-201ENST00000340857 RB1CC1Q8TDY2 1594 aa28.56■■■□□ 2.16
H1F0-201ENST00000340857 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
H1F0-201ENST00000340857 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
H1F0-201ENST00000340857 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
H1F0-201ENST00000340857 UNC13AQ9UPW8 1703 aa27.97■■■□□ 2.07
H1F0-201ENST00000340857 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
H1F0-201ENST00000340857 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
H1F0-201ENST00000340857 CHIC1Q5VXU3 224 aa27.41■■□□□ 1.98
H1F0-201ENST00000340857 CECR2Q9BXF3 1484 aa27.27■■□□□ 1.96
H1F0-201ENST00000340857 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.91
H1F0-201ENST00000340857 BAZ1AQ9NRL2 1556 aaPredicted RBP26.98■■□□□ 1.91
H1F0-201ENST00000340857 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
H1F0-201ENST00000340857 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
H1F0-201ENST00000340857 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
H1F0-201ENST00000340857 HRCP23327 699 aa26.88■■□□□ 1.89
H1F0-201ENST00000340857 WIZO95785 1651 aa26.73■■□□□ 1.87
H1F0-201ENST00000340857 CC2D2AQ9P2K1 1620 aa26.71■■□□□ 1.87
H1F0-201ENST00000340857 DNAJC5BQ9UF47 199 aa26.7■■□□□ 1.86
H1F0-201ENST00000340857 PCGF6Q9BYE7 350 aa26.69■■□□□ 1.86
H1F0-201ENST00000340857 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
H1F0-201ENST00000340857 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
H1F0-201ENST00000340857 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
H1F0-201ENST00000340857 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
H1F0-201ENST00000340857 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
H1F0-201ENST00000340857 BAZ1BQ9UIG0 1483 aaKnown RBP26.47■■□□□ 1.83
H1F0-201ENST00000340857 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.82
H1F0-201ENST00000340857 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
H1F0-201ENST00000340857 PPARGC1BQ86YN6 1023 aaKnown RBP26.23■■□□□ 1.79
H1F0-201ENST00000340857 TRIM26Q12899 539 aaPredicted RBP26.19■■□□□ 1.78
H1F0-201ENST00000340857 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
H1F0-201ENST00000340857 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
H1F0-201ENST00000340857 FAM9AQ8IZU1 332 aaPredicted RBP25.87■■□□□ 1.73
H1F0-201ENST00000340857 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
H1F0-201ENST00000340857 NESP48681 1621 aa25.83■■□□□ 1.72
H1F0-201ENST00000340857 CFTRP13569 1480 aa25.8■■□□□ 1.72
H1F0-201ENST00000340857 ZEB1P37275 1124 aaPredicted RBP25.71■■□□□ 1.71
H1F0-201ENST00000340857 LAMC3Q9Y6N6 1575 aa25.66■■□□□ 1.7
H1F0-201ENST00000340857 EHMT2Q96KQ7 1210 aa25.6■■□□□ 1.69
H1F0-201ENST00000340857 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
H1F0-201ENST00000340857 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
H1F0-201ENST00000340857 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
H1F0-201ENST00000340857 ABCC8Q09428 1581 aa25.47■■□□□ 1.67
H1F0-201ENST00000340857 KIF21AQ7Z4S6 1674 aa25.41■■□□□ 1.66
H1F0-201ENST00000340857 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
H1F0-201ENST00000340857 ERCC6Q03468 1493 aa25.36■■□□□ 1.65
H1F0-201ENST00000340857 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
H1F0-201ENST00000340857 CUX1P39880 1505 aa25.27■■□□□ 1.64
H1F0-201ENST00000340857 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
H1F0-201ENST00000340857 URB2Q14146 1524 aaKnown RBP25.26■■□□□ 1.63
H1F0-201ENST00000340857 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
H1F0-201ENST00000340857 TOPBP1Q92547 1522 aa25.18■■□□□ 1.62
H1F0-201ENST00000340857 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
H1F0-201ENST00000340857 DNMBPQ6XZF7 1577 aa25.15■■□□□ 1.62
H1F0-201ENST00000340857 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
H1F0-201ENST00000340857 BIVM-ERCC5R4GMW8 1640 aa25.11■■□□□ 1.61
H1F0-201ENST00000340857 WDR62O43379 1518 aa25.1■■□□□ 1.61
H1F0-201ENST00000340857 SOGA1O94964 1423 aa25.09■■□□□ 1.61
H1F0-201ENST00000340857 FGD5Q6ZNL6 1462 aa25.07■■□□□ 1.6
H1F0-201ENST00000340857 CEP162Q5TB80 1403 aa25.07■■□□□ 1.6
H1F0-201ENST00000340857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.07■■□□□ 1.6
H1F0-201ENST00000340857 EEA1Q15075 1411 aa25.06■■□□□ 1.6
H1F0-201ENST00000340857 POLA1P09884 1462 aaPredicted RBP25.04■■□□□ 1.6
H1F0-201ENST00000340857 TNIKQ9UKE5 1360 aa25.04■■□□□ 1.6
H1F0-201ENST00000340857 CCER1Q8TC90 406 aaPredicted RBP25.02■■□□□ 1.6
H1F0-201ENST00000340857 RAD54L2Q9Y4B4 1467 aa24.99■■□□□ 1.59
H1F0-201ENST00000340857 CSRNP3Q8WYN3 585 aa24.97■■□□□ 1.59
H1F0-201ENST00000340857 CUX2O14529 1486 aa24.97■■□□□ 1.59
H1F0-201ENST00000340857 RUSC2Q8N2Y8 1516 aa24.95■■□□□ 1.58
H1F0-201ENST00000340857 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
H1F0-201ENST00000340857 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
H1F0-201ENST00000340857 SCAF1Q9H7N4 1312 aaKnown RBP24.84■■□□□ 1.57
H1F0-201ENST00000340857 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
H1F0-201ENST00000340857 TTBK1Q5TCY1 1321 aaPredicted RBP24.84■■□□□ 1.57
H1F0-201ENST00000340857 ABCA10Q8WWZ4 1543 aa24.82■■□□□ 1.56
H1F0-201ENST00000340857 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
H1F0-201ENST00000340857 TDRD9Q8NDG6 1382 aaKnown RBP24.81■■□□□ 1.56
H1F0-201ENST00000340857 ZNF608Q9ULD9 1512 aaPredicted RBP24.79■■□□□ 1.56
H1F0-201ENST00000340857 WDR97A6NE52 1622 aa24.74■■□□□ 1.55
H1F0-201ENST00000340857 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.554e-9■□□□□ 8.9
H1F0-201ENST00000340857 KIF27Q86VH2 1401 aa24.72■■□□□ 1.55
H1F0-201ENST00000340857 KIF21BO75037 1637 aa24.69■■□□□ 1.54
H1F0-201ENST00000340857 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
H1F0-201ENST00000340857 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.54
H1F0-201ENST00000340857 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.53
H1F0-201ENST00000340857 IGF1RP08069 1367 aa24.63■■□□□ 1.53
H1F0-201ENST00000340857 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
H1F0-201ENST00000340857 ACIN1Q9UKV3 1341 aaKnown RBP24.57■■□□□ 1.52
H1F0-201ENST00000340857 CLIP1P30622 1438 aa24.56■■□□□ 1.52
H1F0-201ENST00000340857 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
H1F0-201ENST00000340857 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
H1F0-201ENST00000340857 NEUROD1Q13562 356 aa24.51■■□□□ 1.51
H1F0-201ENST00000340857 VPS8Q8N3P4 1428 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms