RNA–Protein interactions for RNA: ENST00000216267.12

BRD1-201, Transcript of bromodomain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRD1, Length 4,614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-201ENST00000216267 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
BRD1-201ENST00000216267 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
BRD1-201ENST00000216267 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
BRD1-201ENST00000216267 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
BRD1-201ENST00000216267 PCGF6Q9BYE7 350 aa21.01■□□□□ 0.95
BRD1-201ENST00000216267 EHMT2Q96KQ7 1210 aa20.93■□□□□ 0.94
BRD1-201ENST00000216267 FAM9AQ8IZU1 332 aaPredicted RBP20.76■□□□□ 0.91
BRD1-201ENST00000216267 ABCC9O60706 1549 aa20.73■□□□□ 0.91
BRD1-201ENST00000216267 TRIM41Q8WV44 630 aa20.65■□□□□ 0.9
BRD1-201ENST00000216267 ZEB1P37275 1124 aaPredicted RBP20.65■□□□□ 0.9
BRD1-201ENST00000216267 CCDC180Q9P1Z9 1646 aa20.57■□□□□ 0.88
BRD1-201ENST00000216267 APLP2Q06481 763 aa20.51■□□□□ 0.87
BRD1-201ENST00000216267 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
BRD1-201ENST00000216267 HRCP23327 699 aa20.46■□□□□ 0.87
BRD1-201ENST00000216267 TRIM26Q12899 539 aaPredicted RBP20.35■□□□□ 0.85
BRD1-201ENST00000216267 PELP1Q8IZL8 1130 aaKnown RBP20.33■□□□□ 0.85
BRD1-201ENST00000216267 TTBK1Q5TCY1 1321 aaPredicted RBP20.3■□□□□ 0.84
BRD1-201ENST00000216267 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
BRD1-201ENST00000216267 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
BRD1-201ENST00000216267 ZCCHC6Q5VYS8 1495 aaKnown RBP20.21■□□□□ 0.83
BRD1-201ENST00000216267 LOC105371045A0A1W2PR82 267 aa20.2■□□□□ 0.82
BRD1-201ENST00000216267 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
BRD1-201ENST00000216267 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.811e-8■□□□□ 9.4
BRD1-201ENST00000216267 PPARGC1BQ86YN6 1023 aaKnown RBP19.96■□□□□ 0.79
BRD1-201ENST00000216267 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
BRD1-201ENST00000216267 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
BRD1-201ENST00000216267 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
BRD1-201ENST00000216267 NACADO15069 1562 aa19.76■□□□□ 0.75
BRD1-201ENST00000216267 YTHDC1Q96MU7 727 aaKnown RBP19.68■□□□□ 0.74
BRD1-201ENST00000216267 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
BRD1-201ENST00000216267 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
BRD1-201ENST00000216267 MYT1Q01538 1121 aa19.58■□□□□ 0.72
BRD1-201ENST00000216267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
BRD1-201ENST00000216267 HNRNPUL2Q1KMD3 747 aaKnown RBP19.51■□□□□ 0.71
BRD1-201ENST00000216267 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
BRD1-201ENST00000216267 NEFLP07196 543 aa19.45■□□□□ 0.7
BRD1-201ENST00000216267 ERICH6Q7L0X2 663 aa19.34■□□□□ 0.69
BRD1-201ENST00000216267 ITGAEP38570 1179 aa19.32■□□□□ 0.68
BRD1-201ENST00000216267 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
BRD1-201ENST00000216267 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
BRD1-201ENST00000216267 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
BRD1-201ENST00000216267 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
BRD1-201ENST00000216267 GTF3C3Q9Y5Q9 886 aa19.11■□□□□ 0.65
BRD1-201ENST00000216267 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
BRD1-201ENST00000216267 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
BRD1-201ENST00000216267 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
BRD1-201ENST00000216267 FAM50AQ14320 339 aaKnown RBP18.96■□□□□ 0.63
BRD1-201ENST00000216267 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
BRD1-201ENST00000216267 NEUROD1Q13562 356 aa18.83■□□□□ 0.6
BRD1-201ENST00000216267 POLR3GLQ9BT43 218 aa18.79■□□□□ 0.6
BRD1-201ENST00000216267 FBLN2P98095 1184 aa18.76■□□□□ 0.59
BRD1-201ENST00000216267 EEA1Q15075 1411 aa18.75■□□□□ 0.59
BRD1-201ENST00000216267 ANP32CO43423 234 aa18.74■□□□□ 0.59
BRD1-201ENST00000216267 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
BRD1-201ENST00000216267 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
BRD1-201ENST00000216267 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
BRD1-201ENST00000216267 CLSPNQ9HAW4 1339 aa18.69■□□□□ 0.58
BRD1-201ENST00000216267 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
BRD1-201ENST00000216267 CEP162Q5TB80 1403 aa18.68■□□□□ 0.58
BRD1-201ENST00000216267 CLIP1P30622 1438 aa18.64■□□□□ 0.57
BRD1-201ENST00000216267 BCANQ96GW7 911 aa18.63■□□□□ 0.57
BRD1-201ENST00000216267 GOLGA3Q08378 1498 aa18.63■□□□□ 0.57
BRD1-201ENST00000216267 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
BRD1-201ENST00000216267 WRNQ14191 1432 aaPredicted RBP eCLIP18.61■□□□□ 0.57
BRD1-201ENST00000216267 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
BRD1-201ENST00000216267 P3H3Q8IVL6 736 aa18.59■□□□□ 0.57
BRD1-201ENST00000216267 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
BRD1-201ENST00000216267 DAXXQ9UER7 740 aaPredicted RBP18.53■□□□□ 0.56
BRD1-201ENST00000216267 MIER1Q8N108 512 aa18.5■□□□□ 0.55
BRD1-201ENST00000216267 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
BRD1-201ENST00000216267 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
BRD1-201ENST00000216267 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
BRD1-201ENST00000216267 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
BRD1-201ENST00000216267 CDK11AQ9UQ88 783 aaPredicted RBP18.48■□□□□ 0.55
BRD1-201ENST00000216267 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
BRD1-201ENST00000216267 TONSLQ96HA7 1378 aa18.44■□□□□ 0.54
BRD1-201ENST00000216267 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
BRD1-201ENST00000216267 WIZO95785 1651 aa18.43■□□□□ 0.54
BRD1-201ENST00000216267 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
BRD1-201ENST00000216267 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
BRD1-201ENST00000216267 RTL5Q5HYW3 569 aaPredicted RBP18.4■□□□□ 0.54
BRD1-201ENST00000216267 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
BRD1-201ENST00000216267 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
BRD1-201ENST00000216267 ZNF326Q5BKZ1 582 aaKnown RBP18.38■□□□□ 0.53
BRD1-201ENST00000216267 FKBP8Q14318 412 aa18.36■□□□□ 0.53
BRD1-201ENST00000216267 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
BRD1-201ENST00000216267 SOGA1O94964 1423 aa18.31■□□□□ 0.52
BRD1-201ENST00000216267 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
BRD1-201ENST00000216267 HNRNPUQ00839 825 aaKnown RBP eCLIP18.25■□□□□ 0.51
BRD1-201ENST00000216267 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
BRD1-201ENST00000216267 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
BRD1-201ENST00000216267 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
BRD1-201ENST00000216267 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
BRD1-201ENST00000216267 NPM1P06748 294 aaKnown RBP eCLIP18.19■□□□□ 0.5
BRD1-201ENST00000216267 CUX2O14529 1486 aa18.18■□□□□ 0.5
BRD1-201ENST00000216267 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
BRD1-201ENST00000216267 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
BRD1-201ENST00000216267 ZNF777Q9ULD5 760 aaPredicted RBP18.16■□□□□ 0.5
BRD1-201ENST00000216267 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
BRD1-201ENST00000216267 CARMIL1Q5VZK9 1371 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms