RNA–Protein interactions for RNA: ENST00000489843.1

ARF4-206, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3 BASIC

Gene ARF4, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-206ENST00000489843 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
ARF4-206ENST00000489843 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
ARF4-206ENST00000489843 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
ARF4-206ENST00000489843 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
ARF4-206ENST00000489843 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
ARF4-206ENST00000489843 FOXD1Q16676 465 aa16.23■□□□□ 0.19
ARF4-206ENST00000489843 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
ARF4-206ENST00000489843 MSH5O43196 834 aa15.33■□□□□ 0.04
ARF4-206ENST00000489843 ADRA2BP18089 450 aa15.08■□□□□ 0
ARF4-206ENST00000489843 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
ARF4-206ENST00000489843 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
ARF4-206ENST00000489843 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
ARF4-206ENST00000489843 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
ARF4-206ENST00000489843 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
ARF4-206ENST00000489843 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
ARF4-206ENST00000489843 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
ARF4-206ENST00000489843 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
ARF4-206ENST00000489843 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
ARF4-206ENST00000489843 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
ARF4-206ENST00000489843 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
ARF4-206ENST00000489843 KCNA4P22459 653 aa13.28□□□□□ -0.28
ARF4-206ENST00000489843 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
ARF4-206ENST00000489843 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
ARF4-206ENST00000489843 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
ARF4-206ENST00000489843 DNAJC5BQ9UF47 199 aa12.93□□□□□ -0.34
ARF4-206ENST00000489843 POTEHQ6S545 545 aa12.91□□□□□ -0.34
ARF4-206ENST00000489843 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
ARF4-206ENST00000489843 EHMT2Q96KQ7 1210 aa12.71□□□□□ -0.37
ARF4-206ENST00000489843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.38
ARF4-206ENST00000489843 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
ARF4-206ENST00000489843 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
ARF4-206ENST00000489843 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
ARF4-206ENST00000489843 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
ARF4-206ENST00000489843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
ARF4-206ENST00000489843 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
ARF4-206ENST00000489843 ZBTB22O15209 634 aa12.3□□□□□ -0.44
ARF4-206ENST00000489843 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
ARF4-206ENST00000489843 APLP2Q06481 763 aa12.26□□□□□ -0.45
ARF4-206ENST00000489843 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
ARF4-206ENST00000489843 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
ARF4-206ENST00000489843 CAPN15O75808 1086 aa12.12□□□□□ -0.47
ARF4-206ENST00000489843 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
ARF4-206ENST00000489843 DSG3P32926 999 aa12.05□□□□□ -0.48
ARF4-206ENST00000489843 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
ARF4-206ENST00000489843 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
ARF4-206ENST00000489843 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
ARF4-206ENST00000489843 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
ARF4-206ENST00000489843 ABCB7O75027 752 aa11.81□□□□□ -0.52
ARF4-206ENST00000489843 POLA2Q14181 598 aa11.74□□□□□ -0.53
ARF4-206ENST00000489843 ZBTB12Q9Y330 459 aaPredicted RBP11.65□□□□□ -0.55
ARF4-206ENST00000489843 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
ARF4-206ENST00000489843 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
ARF4-206ENST00000489843 FBLN2P98095 1184 aa11.48□□□□□ -0.57
ARF4-206ENST00000489843 CHRDL2Q6WN34 429 aa11.47□□□□□ -0.57
ARF4-206ENST00000489843 OSCARQ8IYS5 282 aa11.35□□□□□ -0.59
ARF4-206ENST00000489843 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
ARF4-206ENST00000489843 SPDYE2BA6NHP3 402 aa11.28□□□□□ -0.6
ARF4-206ENST00000489843 SPDYE6P0CI01 402 aa11.28□□□□□ -0.6
ARF4-206ENST00000489843 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
ARF4-206ENST00000489843 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
ARF4-206ENST00000489843 FKBP8Q14318 412 aa11.16□□□□□ -0.62
ARF4-206ENST00000489843 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
ARF4-206ENST00000489843 SSUH2Q9Y2M2 353 aa11.13□□□□□ -0.63
ARF4-206ENST00000489843 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
ARF4-206ENST00000489843 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
ARF4-206ENST00000489843 PLSCR2Q9NRY7 297 aa11.07□□□□□ -0.64
ARF4-206ENST00000489843 HAX1O00165 279 aa11.03□□□□□ -0.64
ARF4-206ENST00000489843 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
ARF4-206ENST00000489843 PABPN1Q86U42 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
ARF4-206ENST00000489843 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
ARF4-206ENST00000489843 PITPNM1O00562 1244 aa10.97□□□□□ -0.65
ARF4-206ENST00000489843 EVX2Q03828 476 aa10.96□□□□□ -0.65
ARF4-206ENST00000489843 FXR2P51116 673 aaKnown RBP eCLIP10.93□□□□□ -0.66
ARF4-206ENST00000489843 CLEC11AQ9Y240 323 aa10.9□□□□□ -0.67
ARF4-206ENST00000489843 LHX8Q68G74 356 aa10.88□□□□□ -0.67
ARF4-206ENST00000489843 STAG3Q9UJ98 1225 aa10.85□□□□□ -0.67
ARF4-206ENST00000489843 PROM2Q8N271 834 aa10.81□□□□□ -0.68
ARF4-206ENST00000489843 RTN4Q9NQC3 1192 aaKnown RBP10.8□□□□□ -0.68
ARF4-206ENST00000489843 PRR29P0C7W0 189 aa10.79□□□□□ -0.68
ARF4-206ENST00000489843 PRKAR2AP13861 404 aaKnown RBP10.71□□□□□ -0.69
ARF4-206ENST00000489843 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
ARF4-206ENST00000489843 C19orf67A6NJJ6 358 aa10.61□□□□□ -0.71
ARF4-206ENST00000489843 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
ARF4-206ENST00000489843 GABBR2O75899 941 aa10.6□□□□□ -0.71
ARF4-206ENST00000489843 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
ARF4-206ENST00000489843 FBXO3Q9UK99 471 aa10.57□□□□□ -0.72
ARF4-206ENST00000489843 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
ARF4-206ENST00000489843 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
ARF4-206ENST00000489843 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
ARF4-206ENST00000489843 VASPP50552 380 aaPredicted RBP10.48□□□□□ -0.73
ARF4-206ENST00000489843 MIER1Q8N108 512 aa10.48□□□□□ -0.73
ARF4-206ENST00000489843 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
ARF4-206ENST00000489843 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
ARF4-206ENST00000489843 IFNLR1Q8IU57 520 aaPredicted RBP10.43□□□□□ -0.74
ARF4-206ENST00000489843 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
ARF4-206ENST00000489843 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
ARF4-206ENST00000489843 CD44P16070 742 aaKnown RBP10.39□□□□□ -0.75
ARF4-206ENST00000489843 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
ARF4-206ENST00000489843 CLCN6P51797 869 aa10.3□□□□□ -0.76
ARF4-206ENST00000489843 ZRANB1Q9UGI0 708 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms