RNA–Protein interactions for RNA: ENST00000537025.6

KPNA2-202, Transcript of karyopherin subunit alpha 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA2, Length 2,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA2-202ENST00000537025 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
KPNA2-202ENST00000537025 CCDC180Q9P1Z9 1646 aa30.88■■■□□ 2.53
KPNA2-202ENST00000537025 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
KPNA2-202ENST00000537025 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
KPNA2-202ENST00000537025 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
KPNA2-202ENST00000537025 DCAF1Q9Y4B6 1507 aa29.63■■■□□ 2.33
KPNA2-202ENST00000537025 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
KPNA2-202ENST00000537025 MYO15BQ96JP2 1530 aa28.95■■■□□ 2.22
KPNA2-202ENST00000537025 ABCC9O60706 1549 aa28.84■■■□□ 2.21
KPNA2-202ENST00000537025 SCRIBQ14160 1630 aa28.77■■■□□ 2.2
KPNA2-202ENST00000537025 NACADO15069 1562 aa28.64■■■□□ 2.18
KPNA2-202ENST00000537025 CHIC1Q5VXU3 224 aa28.56■■■□□ 2.16
KPNA2-202ENST00000537025 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
KPNA2-202ENST00000537025 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
KPNA2-202ENST00000537025 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
KPNA2-202ENST00000537025 MROH2BQ7Z745 1585 aa27.96■■■□□ 2.07
KPNA2-202ENST00000537025 UNC13AQ9UPW8 1703 aa27.8■■■□□ 2.04
KPNA2-202ENST00000537025 WIZO95785 1651 aa27.79■■■□□ 2.04
KPNA2-202ENST00000537025 BAZ1AQ9NRL2 1556 aaPredicted RBP27.72■■■□□ 2.03
KPNA2-202ENST00000537025 LOC105371045A0A1W2PR82 267 aa27.65■■■□□ 2.02
KPNA2-202ENST00000537025 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
KPNA2-202ENST00000537025 SMARCA4P51532 1647 aa27.53■■■□□ 2
KPNA2-202ENST00000537025 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.99
KPNA2-202ENST00000537025 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
KPNA2-202ENST00000537025 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
KPNA2-202ENST00000537025 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
KPNA2-202ENST00000537025 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
KPNA2-202ENST00000537025 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
KPNA2-202ENST00000537025 SMARCA2P51531 1590 aa27.21■■□□□ 1.95
KPNA2-202ENST00000537025 PCGF6Q9BYE7 350 aa27.2■■□□□ 1.94
KPNA2-202ENST00000537025 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
KPNA2-202ENST00000537025 EHMT2Q96KQ7 1210 aa27■■□□□ 1.91
KPNA2-202ENST00000537025 ABCC8Q09428 1581 aa26.99■■□□□ 1.91
KPNA2-202ENST00000537025 HRCP23327 699 aa26.93■■□□□ 1.9
KPNA2-202ENST00000537025 ATAD2BQ9ULI0 1458 aa26.92■■□□□ 1.9
KPNA2-202ENST00000537025 TRIM26Q12899 539 aaPredicted RBP26.84■■□□□ 1.89
KPNA2-202ENST00000537025 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
KPNA2-202ENST00000537025 SOGA1O94964 1423 aa26.66■■□□□ 1.86
KPNA2-202ENST00000537025 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
KPNA2-202ENST00000537025 RUSC2Q8N2Y8 1516 aa26.54■■□□□ 1.84
KPNA2-202ENST00000537025 EEA1Q15075 1411 aa26.53■■□□□ 1.84
KPNA2-202ENST00000537025 CSRNP3Q8WYN3 585 aa26.51■■□□□ 1.83
KPNA2-202ENST00000537025 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
KPNA2-202ENST00000537025 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
KPNA2-202ENST00000537025 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
KPNA2-202ENST00000537025 PPARGC1BQ86YN6 1023 aaKnown RBP26.38■■□□□ 1.81
KPNA2-202ENST00000537025 TNIKQ9UKE5 1360 aa26.38■■□□□ 1.81
KPNA2-202ENST00000537025 CEP162Q5TB80 1403 aa26.35■■□□□ 1.81
KPNA2-202ENST00000537025 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.81
KPNA2-202ENST00000537025 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
KPNA2-202ENST00000537025 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
KPNA2-202ENST00000537025 CEP164Q9UPV0 1460 aa26.2■■□□□ 1.78
KPNA2-202ENST00000537025 KIF21BO75037 1637 aa26.17■■□□□ 1.78
KPNA2-202ENST00000537025 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
KPNA2-202ENST00000537025 CFTRP13569 1480 aa26.15■■□□□ 1.78
KPNA2-202ENST00000537025 ZEB1P37275 1124 aaPredicted RBP26.08■■□□□ 1.77
KPNA2-202ENST00000537025 CUX1P39880 1505 aa26.06■■□□□ 1.76
KPNA2-202ENST00000537025 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
KPNA2-202ENST00000537025 TTBK1Q5TCY1 1321 aaPredicted RBP26.02■■□□□ 1.76
KPNA2-202ENST00000537025 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
KPNA2-202ENST00000537025 CLIP1P30622 1438 aa25.96■■□□□ 1.75
KPNA2-202ENST00000537025 PRDM2Q13029 1718 aa25.95■■□□□ 1.74
KPNA2-202ENST00000537025 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
KPNA2-202ENST00000537025 PRXQ9BXM0 1461 aa25.87■■□□□ 1.73
KPNA2-202ENST00000537025 KIF27Q86VH2 1401 aa25.86■■□□□ 1.73
KPNA2-202ENST00000537025 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
KPNA2-202ENST00000537025 ERICH3Q5RHP9 1530 aa25.84■■□□□ 1.73
KPNA2-202ENST00000537025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.8■■□□□ 1.72
KPNA2-202ENST00000537025 VPS8Q8N3P4 1428 aa25.8■■□□□ 1.72
KPNA2-202ENST00000537025 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
KPNA2-202ENST00000537025 CUX2O14529 1486 aa25.67■■□□□ 1.7
KPNA2-202ENST00000537025 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
KPNA2-202ENST00000537025 APLP2Q06481 763 aa25.67■■□□□ 1.7
KPNA2-202ENST00000537025 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
KPNA2-202ENST00000537025 IGF1RP08069 1367 aa25.61■■□□□ 1.69
KPNA2-202ENST00000537025 ARAP1Q96P48 1450 aa25.59■■□□□ 1.69
KPNA2-202ENST00000537025 NESP48681 1621 aa25.59■■□□□ 1.69
KPNA2-202ENST00000537025 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
KPNA2-202ENST00000537025 CARMIL1Q5VZK9 1371 aa25.49■■□□□ 1.67
KPNA2-202ENST00000537025 HNRNPUL2Q1KMD3 747 aaKnown RBP25.46■■□□□ 1.67
KPNA2-202ENST00000537025 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
KPNA2-202ENST00000537025 ARHGAP35Q9NRY4 1499 aa25.45■■□□□ 1.67
KPNA2-202ENST00000537025 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
KPNA2-202ENST00000537025 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
KPNA2-202ENST00000537025 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
KPNA2-202ENST00000537025 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
KPNA2-202ENST00000537025 KANK4Q5T7N3 995 aaPredicted RBP25.38■■□□□ 1.65
KPNA2-202ENST00000537025 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
KPNA2-202ENST00000537025 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
KPNA2-202ENST00000537025 PDS5BQ9NTI5 1447 aa25.28■■□□□ 1.64
KPNA2-202ENST00000537025 CUL7Q14999 1698 aa25.19■■□□□ 1.62
KPNA2-202ENST00000537025 WDR97A6NE52 1622 aa25.18■■□□□ 1.62
KPNA2-202ENST00000537025 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
KPNA2-202ENST00000537025 TDRD9Q8NDG6 1382 aaKnown RBP25.15■■□□□ 1.62
KPNA2-202ENST00000537025 P3H3Q8IVL6 736 aa25.15■■□□□ 1.62
KPNA2-202ENST00000537025 RRBP1Q9P2E9 1410 aaKnown RBP25.14■■□□□ 1.62
KPNA2-202ENST00000537025 TIAM1Q13009 1591 aa25.11■■□□□ 1.61
KPNA2-202ENST00000537025 MAP3K1Q13233 1512 aa25.1■■□□□ 1.61
KPNA2-202ENST00000537025 FHAD1B1AJZ9 1412 aa25.09■■□□□ 1.61
KPNA2-202ENST00000537025 ABCA5Q8WWZ7 1642 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms