RNA–Protein interactions for RNA: ENST00000486310.5

ARF4-204, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 1,601 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-204ENST00000486310 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
ARF4-204ENST00000486310 AEBP2Q6ZN18 517 aaPredicted RBP15.5■□□□□ 0.07
ARF4-204ENST00000486310 CHIC1Q5VXU3 224 aa14.41□□□□□ -0.1
ARF4-204ENST00000486310 CCDC180Q9P1Z9 1646 aa14.28□□□□□ -0.12
ARF4-204ENST00000486310 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
ARF4-204ENST00000486310 ABCC9O60706 1549 aa13.59□□□□□ -0.23
ARF4-204ENST00000486310 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.26
ARF4-204ENST00000486310 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
ARF4-204ENST00000486310 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
ARF4-204ENST00000486310 NACADO15069 1562 aa13.33□□□□□ -0.28
ARF4-204ENST00000486310 SENP3Q9H4L4 574 aaPredicted RBP13.28□□□□□ -0.28
ARF4-204ENST00000486310 RB1CC1Q8TDY2 1594 aa13.26□□□□□ -0.29
ARF4-204ENST00000486310 SHROOM4Q9ULL8 1493 aa13.06□□□□□ -0.32
ARF4-204ENST00000486310 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
ARF4-204ENST00000486310 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.33
ARF4-204ENST00000486310 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
ARF4-204ENST00000486310 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
ARF4-204ENST00000486310 BICRAQ9NZM4 1560 aa12.8□□□□□ -0.36
ARF4-204ENST00000486310 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
ARF4-204ENST00000486310 CECR2Q9BXF3 1484 aa12.58□□□□□ -0.4
ARF4-204ENST00000486310 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
ARF4-204ENST00000486310 SMARCA4P51532 1647 aa12.52□□□□□ -0.41
ARF4-204ENST00000486310 SUPT5HO00267 1087 aaKnown RBP12.51□□□□□ -0.41
ARF4-204ENST00000486310 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
ARF4-204ENST00000486310 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
ARF4-204ENST00000486310 FOXD1Q16676 465 aa12.49□□□□□ -0.41
ARF4-204ENST00000486310 EIF4G1Q04637 1599 aaKnown RBP12.46□□□□□ -0.42
ARF4-204ENST00000486310 WIZO95785 1651 aa12.4□□□□□ -0.42
ARF4-204ENST00000486310 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
ARF4-204ENST00000486310 SMARCA2P51531 1590 aa12.37□□□□□ -0.43
ARF4-204ENST00000486310 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
ARF4-204ENST00000486310 CC2D2AQ9P2K1 1620 aa12.31□□□□□ -0.44
ARF4-204ENST00000486310 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
ARF4-204ENST00000486310 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
ARF4-204ENST00000486310 NCAPD3P42695 1498 aa12.28□□□□□ -0.44
ARF4-204ENST00000486310 HMGXB3Q12766 1538 aa12.27□□□□□ -0.45
ARF4-204ENST00000486310 CCDC88BA6NC98 1476 aa12.15□□□□□ -0.46
ARF4-204ENST00000486310 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
ARF4-204ENST00000486310 CFTRP13569 1480 aa11.96□□□□□ -0.5
ARF4-204ENST00000486310 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
ARF4-204ENST00000486310 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
ARF4-204ENST00000486310 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
ARF4-204ENST00000486310 MSH5O43196 834 aa11.92□□□□□ -0.5
ARF4-204ENST00000486310 NESP48681 1621 aa11.85□□□□□ -0.51
ARF4-204ENST00000486310 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
ARF4-204ENST00000486310 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
ARF4-204ENST00000486310 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
ARF4-204ENST00000486310 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
ARF4-204ENST00000486310 WRNQ14191 1432 aaPredicted RBP eCLIP11.8□□□□□ -0.52
ARF4-204ENST00000486310 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.52
ARF4-204ENST00000486310 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
ARF4-204ENST00000486310 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
ARF4-204ENST00000486310 SYNJ1O43426 1573 aa11.73□□□□□ -0.53
ARF4-204ENST00000486310 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
ARF4-204ENST00000486310 ERCC6Q03468 1493 aa11.71□□□□□ -0.53
ARF4-204ENST00000486310 CUX1P39880 1505 aa11.7□□□□□ -0.54
ARF4-204ENST00000486310 DNMBPQ6XZF7 1577 aa11.69□□□□□ -0.54
ARF4-204ENST00000486310 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
ARF4-204ENST00000486310 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
ARF4-204ENST00000486310 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.54
ARF4-204ENST00000486310 FGD5Q6ZNL6 1462 aa11.62□□□□□ -0.55
ARF4-204ENST00000486310 WDR62O43379 1518 aa11.61□□□□□ -0.55
ARF4-204ENST00000486310 THOC2Q8NI27 1593 aaKnown RBP11.6□□□□□ -0.55
ARF4-204ENST00000486310 EEA1Q15075 1411 aa11.59□□□□□ -0.55
ARF4-204ENST00000486310 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
ARF4-204ENST00000486310 SOGA1O94964 1423 aa11.57□□□□□ -0.56
ARF4-204ENST00000486310 FAM9AQ8IZU1 332 aaPredicted RBP11.55□□□□□ -0.56
ARF4-204ENST00000486310 KIF27Q86VH2 1401 aa11.54□□□□□ -0.56
ARF4-204ENST00000486310 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
ARF4-204ENST00000486310 RAD54L2Q9Y4B4 1467 aa11.53□□□□□ -0.56
ARF4-204ENST00000486310 CUX2O14529 1486 aa11.52□□□□□ -0.57
ARF4-204ENST00000486310 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
ARF4-204ENST00000486310 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
ARF4-204ENST00000486310 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
ARF4-204ENST00000486310 WDR97A6NE52 1622 aa11.5□□□□□ -0.57
ARF4-204ENST00000486310 TARBP1Q13395 1621 aaKnown RBP11.5□□□□□ -0.57
ARF4-204ENST00000486310 PIAS4Q8N2W9 510 aaPredicted RBP11.46□□□□□ -0.57
ARF4-204ENST00000486310 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
ARF4-204ENST00000486310 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
ARF4-204ENST00000486310 GAPVD1Q14C86 1478 aa11.43□□□□□ -0.58
ARF4-204ENST00000486310 KIF21BO75037 1637 aa11.41□□□□□ -0.58
ARF4-204ENST00000486310 IGF1RP08069 1367 aa11.41□□□□□ -0.58
ARF4-204ENST00000486310 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
ARF4-204ENST00000486310 PBRM1Q86U86 1689 aa11.4□□□□□ -0.58
ARF4-204ENST00000486310 CUL7Q14999 1698 aa11.4□□□□□ -0.59
ARF4-204ENST00000486310 ZNF608Q9ULD9 1512 aaPredicted RBP11.39□□□□□ -0.59
ARF4-204ENST00000486310 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
ARF4-204ENST00000486310 LOC105371045A0A1W2PR82 267 aa11.39□□□□□ -0.59
ARF4-204ENST00000486310 EIF4G3O43432 1585 aaKnown RBP11.39□□□□□ -0.59
ARF4-204ENST00000486310 GOLGA3Q08378 1498 aa11.39□□□□□ -0.59
ARF4-204ENST00000486310 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
ARF4-204ENST00000486310 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
ARF4-204ENST00000486310 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
ARF4-204ENST00000486310 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
ARF4-204ENST00000486310 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
ARF4-204ENST00000486310 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
ARF4-204ENST00000486310 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
ARF4-204ENST00000486310 TNIKQ9UKE5 1360 aa11.31□□□□□ -0.6
ARF4-204ENST00000486310 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
ARF4-204ENST00000486310 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 320.1 ms