RNA–Protein interactions for RNA: ENST00000249364.8

CALU-201, Transcript of calumenin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALU, Length 3,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-201ENST00000249364 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
CALU-201ENST00000249364 CCDC180Q9P1Z9 1646 aa24.31■■□□□ 1.48
CALU-201ENST00000249364 ZCCHC6Q5VYS8 1495 aaKnown RBP23.23■■□□□ 1.31
CALU-201ENST00000249364 ABCC9O60706 1549 aa23.05■■□□□ 1.28
CALU-201ENST00000249364 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
CALU-201ENST00000249364 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
CALU-201ENST00000249364 MYO15BQ96JP2 1530 aa22.8■■□□□ 1.24
CALU-201ENST00000249364 NACADO15069 1562 aa22.69■■□□□ 1.22
CALU-201ENST00000249364 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
CALU-201ENST00000249364 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
CALU-201ENST00000249364 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
CALU-201ENST00000249364 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
CALU-201ENST00000249364 BICRAQ9NZM4 1560 aa21.79■■□□□ 1.08
CALU-201ENST00000249364 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
CALU-201ENST00000249364 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
CALU-201ENST00000249364 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
CALU-201ENST00000249364 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
CALU-201ENST00000249364 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.01
CALU-201ENST00000249364 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
CALU-201ENST00000249364 SMARCA4P51532 1647 aa21.34■■□□□ 1.01
CALU-201ENST00000249364 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
CALU-201ENST00000249364 WIZO95785 1651 aa21.16■□□□□ 0.98
CALU-201ENST00000249364 PEG3Q9GZU2 1588 aa21.13■□□□□ 0.97
CALU-201ENST00000249364 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
CALU-201ENST00000249364 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
CALU-201ENST00000249364 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
CALU-201ENST00000249364 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
CALU-201ENST00000249364 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
CALU-201ENST00000249364 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
CALU-201ENST00000249364 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
CALU-201ENST00000249364 CCDC88BA6NC98 1476 aa20.74■□□□□ 0.91
CALU-201ENST00000249364 DNAJC5BQ9UF47 199 aa20.46■□□□□ 0.87
CALU-201ENST00000249364 CHIC1Q5VXU3 224 aa20.44■□□□□ 0.86
CALU-201ENST00000249364 CFTRP13569 1480 aa20.38■□□□□ 0.85
CALU-201ENST00000249364 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
CALU-201ENST00000249364 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
CALU-201ENST00000249364 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
CALU-201ENST00000249364 TRIM41Q8WV44 630 aa20.22■□□□□ 0.83
CALU-201ENST00000249364 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
CALU-201ENST00000249364 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.82
CALU-201ENST00000249364 NESP48681 1621 aa20.16■□□□□ 0.82
CALU-201ENST00000249364 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
CALU-201ENST00000249364 PDS5BQ9NTI5 1447 aa20.1■□□□□ 0.81
CALU-201ENST00000249364 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
CALU-201ENST00000249364 TOP2BQ02880 1626 aa20.03■□□□□ 0.8
CALU-201ENST00000249364 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.8
CALU-201ENST00000249364 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.8
CALU-201ENST00000249364 CUX1P39880 1505 aa19.98■□□□□ 0.79
CALU-201ENST00000249364 KIF21AQ7Z4S6 1674 aa19.95■□□□□ 0.78
CALU-201ENST00000249364 DNMBPQ6XZF7 1577 aa19.92■□□□□ 0.78
CALU-201ENST00000249364 TOPBP1Q92547 1522 aa19.87■□□□□ 0.77
CALU-201ENST00000249364 URB2Q14146 1524 aaKnown RBP19.84■□□□□ 0.77
CALU-201ENST00000249364 EEA1Q15075 1411 aa19.83■□□□□ 0.77
CALU-201ENST00000249364 MRC2Q9UBG0 1479 aa19.83■□□□□ 0.76
CALU-201ENST00000249364 ERCC6Q03468 1493 aa19.83■□□□□ 0.76
CALU-201ENST00000249364 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
CALU-201ENST00000249364 SOGA1O94964 1423 aa19.78■□□□□ 0.76
CALU-201ENST00000249364 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
CALU-201ENST00000249364 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
CALU-201ENST00000249364 WDR62O43379 1518 aa19.73■□□□□ 0.75
CALU-201ENST00000249364 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
CALU-201ENST00000249364 THOC2Q8NI27 1593 aaKnown RBP19.69■□□□□ 0.74
CALU-201ENST00000249364 KIF27Q86VH2 1401 aa19.69■□□□□ 0.74
CALU-201ENST00000249364 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
CALU-201ENST00000249364 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
CALU-201ENST00000249364 CUX2O14529 1486 aa19.64■□□□□ 0.73
CALU-201ENST00000249364 RAD54L2Q9Y4B4 1467 aa19.64■□□□□ 0.73
CALU-201ENST00000249364 WDR97A6NE52 1622 aa19.6■□□□□ 0.73
CALU-201ENST00000249364 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
CALU-201ENST00000249364 LOC105371045A0A1W2PR82 267 aa19.59■□□□□ 0.73
CALU-201ENST00000249364 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
CALU-201ENST00000249364 KIF21BO75037 1637 aa19.54■□□□□ 0.72
CALU-201ENST00000249364 IGF1RP08069 1367 aa19.5■□□□□ 0.71
CALU-201ENST00000249364 ABCA5Q8WWZ7 1642 aa19.5■□□□□ 0.71
CALU-201ENST00000249364 GOLGA3Q08378 1498 aa19.49■□□□□ 0.71
CALU-201ENST00000249364 PRXQ9BXM0 1461 aa19.49■□□□□ 0.71
CALU-201ENST00000249364 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
CALU-201ENST00000249364 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
CALU-201ENST00000249364 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
CALU-201ENST00000249364 CUL7Q14999 1698 aa19.42■□□□□ 0.7
CALU-201ENST00000249364 CARMIL1Q5VZK9 1371 aa19.42■□□□□ 0.7
CALU-201ENST00000249364 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
CALU-201ENST00000249364 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
CALU-201ENST00000249364 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
CALU-201ENST00000249364 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
CALU-201ENST00000249364 AQRO60306 1485 aaKnown RBP eCLIP19.39■□□□□ 0.697e-9■■■■□ 24
CALU-201ENST00000249364 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
CALU-201ENST00000249364 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
CALU-201ENST00000249364 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
CALU-201ENST00000249364 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
CALU-201ENST00000249364 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
CALU-201ENST00000249364 ADAMTS12P58397 1594 aa19.26■□□□□ 0.67
CALU-201ENST00000249364 MAGI1Q96QZ7 1491 aaPredicted RBP19.25■□□□□ 0.67
CALU-201ENST00000249364 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
CALU-201ENST00000249364 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
CALU-201ENST00000249364 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
CALU-201ENST00000249364 CLIP1P30622 1438 aa19.16■□□□□ 0.66
CALU-201ENST00000249364 CTTNBP2Q8WZ74 1663 aa19.15■□□□□ 0.66
CALU-201ENST00000249364 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
CALU-201ENST00000249364 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms