Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FAM78BQ5VT40 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FAM78BQ5VT40 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
FAM78BQ5VT40 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.37■□□□□ 0.37
FAM78BQ5VT40 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
FAM78BQ5VT40 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.37■□□□□ 0.37
FAM78BQ5VT40 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FAM78BQ5VT40 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FAM78BQ5VT40 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 AL353803.4-201ENST00000565882 1934 ntBASIC17.36■□□□□ 0.37
FAM78BQ5VT40 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
FAM78BQ5VT40 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 ATP5G2P3-201ENST00000429083 425 ntBASIC17.35■□□□□ 0.37
FAM78BQ5VT40 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 FBXW4P1-201ENST00000426721 2239 ntBASIC17.35■□□□□ 0.37
FAM78BQ5VT40 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
FAM78BQ5VT40 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 AC004987.1-201ENST00000428627 508 ntBASIC17.34■□□□□ 0.37
FAM78BQ5VT40 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 BHLHE23-202ENST00000612929 1109 ntBASIC17.34■□□□□ 0.37
FAM78BQ5VT40 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FAM78BQ5VT40 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM78BQ5VT40 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM78BQ5VT40 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.33■□□□□ 0.37
FAM78BQ5VT40 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM78BQ5VT40 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FAM78BQ5VT40 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FAM78BQ5VT40 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM78BQ5VT40 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.33■□□□□ 0.36
FAM78BQ5VT40 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FAM78BQ5VT40 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FAM78BQ5VT40 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 AC073130.3-201ENST00000624389 2278 ntBASIC17.32■□□□□ 0.36
FAM78BQ5VT40 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 AC080038.3-201ENST00000623346 1952 ntBASIC17.32■□□□□ 0.36
FAM78BQ5VT40 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FAM78BQ5VT40 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM78BQ5VT40 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FAM78BQ5VT40 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM78BQ5VT40 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM78BQ5VT40 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FAM78BQ5VT40 TSPY13P-201ENST00000338964 914 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms