Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
SNAI3Q3KNW1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNAI3Q3KNW1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 pRNA.6-201ENST00000610482 90 ntBASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 pRNA.5-201ENST00000612139 90 ntBASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 pRNA.11-201ENST00000618423 90 ntBASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 pRNA.13-201ENST00000619112 90 ntBASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNAI3Q3KNW1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SNAI3Q3KNW1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 AC139530.1-201ENST00000575312 1977 ntBASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 MIR4466-201ENST00000606121 54 ntBASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 AC133637.1-201ENST00000624115 1537 ntBASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNAI3Q3KNW1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNAI3Q3KNW1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 AC131281.2-201ENST00000520478 145 ntBASIC19.02■□□□□ 0.64
SNAI3Q3KNW1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms